STRINGSTRING
AGB02338.1 AGB02338.1 AGB02339.1 AGB02339.1 AGB02340.1 AGB02340.1 AGB02341.1 AGB02341.1 AGB02342.1 AGB02342.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGB02338.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (343 aa)
AGB02339.1Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein. (329 aa)
AGB02340.1PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase. (313 aa)
AGB02341.1Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. (313 aa)
AGB02342.1dTDP-4-dehydrorhamnose reductase; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase. (313 aa)
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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