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AGB01289.1 | PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain. (165 aa) | ||||
AGB01290.1 | Putative methanogenesis marker protein 7; PFAM: Methyl-coenzyme M reductase operon protein C; TIGRFAM: putative methanogenesis marker protein 7. (312 aa) | ||||
AGB01291.1 | Putative methanogenesis marker protein 17; PFAM: Uncharacterized protein conserved in archaea (DUF2113); TIGRFAM: putative methanogenesis marker protein 17. (194 aa) | ||||
AGB01292.1 | Putative methanogenesis marker protein 15; PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; putative methanogenesis marker protein 15. (412 aa) | ||||
AGB01293.1 | Putative methanogenesis marker protein 5; PFAM: Uncharacterized protein conserved in archaea (DUF2112); TIGRFAM: putative methanogenesis marker protein 5. (148 aa) | ||||
AGB01294.1 | Putative methanogenesis marker protein 6; PFAM: Uncharacterized protein conserved in archaea (DUF2102); TIGRFAM: putative methanogenesis marker protein 6. (152 aa) | ||||
AGB01295.1 | TIGRFAM: putative methanogenesis marker protein 3; Belongs to the UPF0288 family. (509 aa) | ||||
AGB01296.1 | PFAM: ABC transporter; TIGRFAM: methyl coenzyme M reductase system, component A2. (537 aa) | ||||
AGB01297.1 | Soluble P-type ATPase; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC. (285 aa) | ||||
AGB01445.1 | beta-RFAP synthase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; Protein of unknown function (DUF98); TIGRFAM: beta-RFAP synthase. (510 aa) | ||||
AGB01693.1 | NADH:ubiquinone oxidoreductase chain I-like protein; PFAM: 4Fe-4S binding domain. (87 aa) | ||||
AGB01694.1 | Formylmethanofuran dehydrogenase subunit D; PFAM: Molydopterin dinucleotide binding domain. (136 aa) | ||||
AGB01695.1 | PFAM: Molybdopterin oxidoreductase; TIGRFAM: formylmethanofuran dehydrogenase subunit B. (441 aa) | ||||
AGB01696.1 | PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A. (569 aa) | ||||
AGB01697.1 | PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C. (266 aa) | ||||
AGB01705.1 | PFAM: FmdE, Molybdenum formylmethanofuran dehydrogenase operon. (211 aa) | ||||
AGB01707.1 | Formate dehydrogenase, alpha subunit, archaeal-type; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type. (689 aa) | ||||
AGB01708.1 | PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus. (383 aa) | ||||
AGB01710.1 | Formate dehydrogenase, alpha subunit, archaeal-type; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type. (688 aa) | ||||
AGB01711.1 | PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus. (418 aa) | ||||
AGB01715.1 | PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C. (268 aa) | ||||
AGB01716.1 | PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A. (576 aa) | ||||
AGB01717.1 | PFAM: Molybdopterin oxidoreductase; TIGRFAM: formylmethanofuran dehydrogenase subunit B. (458 aa) | ||||
AGB01718.1 | Formylmethanofuran dehydrogenase subunit D; PFAM: Molydopterin dinucleotide binding domain. (136 aa) | ||||
AGB01719.1 | NADH:ubiquinone oxidoreductase chain I-like protein; PFAM: 4Fe-4S binding domain. (87 aa) | ||||
AGB01737.1 | Formate dehydrogenase, alpha subunit, archaeal-type; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type. (686 aa) | ||||
AGB01738.1 | PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus. (417 aa) | ||||
AGB01742.1 | Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: 4Fe-4S binding domain. (86 aa) | ||||
AGB01743.1 | Formylmethanofuran dehydrogenase subunit D; PFAM: Molydopterin dinucleotide binding domain. (135 aa) | ||||
AGB01744.1 | PFAM: Molybdopterin oxidoreductase; TIGRFAM: formylmethanofuran dehydrogenase subunit B. (438 aa) | ||||
AGB01745.1 | PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A. (570 aa) | ||||
AGB01746.1 | PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C. (266 aa) | ||||
AGB01767.1 | PFAM: TfuA-like protein. (217 aa) | ||||
AGB01768.1 | Putative methanogenesis marker protein 1; PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; putative methanogenesis marker protein 1; bacteriocin biosynthesis docking scaffold, SagD family. (403 aa) | ||||
AGB01769.1 | Hypothetical protein. (130 aa) | ||||
AGB01912.1 | PFAM: Hydrogenase maturation protease; TIGRFAM: coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit); hydrogenase maturation protease. (183 aa) | ||||
AGB01927.1 | PFAM: Methyl-coenzyme M reductase beta subunit, C-terminal domain; Methyl-coenzyme M reductase beta subunit, N-terminal domain; TIGRFAM: methyl-coenzyme M reductase, beta subunit. (434 aa) | ||||
AGB01928.1 | PFAM: Methyl-coenzyme M reductase operon protein D; TIGRFAM: methyl-coenzyme M reductase operon protein D. (167 aa) | ||||
AGB01929.1 | PFAM: Methyl-coenzyme M reductase gamma subunit; TIGRFAM: methyl-coenzyme M reductase, gamma subunit. (255 aa) | ||||
AGB01930.1 | Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis. (570 aa) | ||||
AGB02011.1 | Pyridoxamine 5'-phosphate oxidase-related, FMN binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase. (134 aa) | ||||
AGB02183.1 | Pyridine nucleotide-disulfide oxidoreductase; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). (427 aa) | ||||
AGB02264.1 | PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus. (340 aa) | ||||
mfnB | Hypothetical protein; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P). (228 aa) | ||||
AGB02315.1 | hisA/hisF family protein; PFAM: Histidine biosynthesis protein; TIGRFAM: hisA/hisF family protein; Belongs to the HisA/HisF family. (223 aa) | ||||
AGB02356.1 | Putative methanogenesis marker protein 10; PFAM: Radical SAM superfamily; Protein of unknown function (DUF512); TIGRFAM: putative methanogenesis marker protein 10. (408 aa) | ||||
AGB02364.1 | PFAM: Uncharacterized protein conserved in archaea (DUF2111). (140 aa) | ||||
AGB02380.1 | Hydrogenase maturation factor; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain. (442 aa) | ||||
AGB02431.1 | Putative methanogenesis marker protein 8; PFAM: Uncharacterized protein conserved in archaea (DUF2099); TIGRFAM: putative methanogenesis marker protein 8. (286 aa) | ||||
AGB02737.1 | Putative sugar kinase; PFAM: GHMP kinases N terminal domain; TIGRFAM: beta-RFAP synthase. (359 aa) | ||||
cbiA-3 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source. (457 aa) | ||||
AGB02772.1 | PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: putative methanogenesis marker 13 metalloprotein. (354 aa) | ||||
AGB02773.1 | Hypothetical protein. (406 aa) | ||||
AGB02774.1 | Hypothetical protein; PFAM: CbiX. (132 aa) | ||||
AGB02775.1 | Holliday junction resolvase. (150 aa) | ||||
AGB02776.1 | Putative methanogenesis marker domain 9; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, putative; putative methanogenesis marker domain 9. (379 aa) | ||||
AGB02777.1 | Triphosphoribosyl-dephospho-CoA synthetase; PFAM: ATP:dephospho-CoA triphosphoribosyl transferase. (273 aa) | ||||
AGB02778.1 | PFAM: Protein of unknown function (DUF447). (188 aa) | ||||
AGB02900.1 | Putative ATP-utilizing enzyme (ATP-grasp superfamily); PFAM: ATP-grasp domain. (295 aa) | ||||
AGB02901.1 | PFAM: Hydantoinase/oxoprolinase; TIGRFAM: probable H4MPT-linked C1 transfer pathway protein. (313 aa) | ||||
AGB02987.1 | PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase. (296 aa) | ||||
AGB03312.1 | Putative methanogenesis marker protein 2; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: putative methanogenesis marker protein 2. (349 aa) | ||||
AGB03313.1 | TIGRFAM: putative methanogen marker protein 4. (254 aa) | ||||
AGB03314.1 | Histones H3 and H4; PFAM: Histone-like transcription factor (CBF/NF-Y) and archaeal histone. (68 aa) | ||||
AGB03409.1 | Putative transcriptional regulator with an HTH domain; PFAM: Helix-turn-helix. (177 aa) | ||||
AGB03467.1 | Putative methanogenesis marker protein 8; PFAM: Uncharacterized protein conserved in archaea (DUF2099); TIGRFAM: putative methanogenesis marker protein 8. (288 aa) | ||||
mch | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. (314 aa) | ||||
AGB03531.1 | TIGRFAM: putative methanogenesis marker protein 12; Belongs to the UPF0285 family. (290 aa) | ||||
ftr | Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family. (294 aa) | ||||
AGB03591.1 | Hypothetical protein; Manually curated. (88 aa) | ||||
AGB03592.1 | PFAM: 4Fe-4S binding domain. (408 aa) | ||||
AGB03593.1 | TIGRFAM: CoB--CoM heterodisulfide reductase, subunit C. (193 aa) | ||||
AGB03594.1 | PFAM: Cysteine-rich domain; TIGRFAM: CoB--CoM heterodisulfide reductase, subunit B. (307 aa) | ||||
AGB03595.1 | Polyferredoxin, heterodixulfide reductase subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). (725 aa) | ||||
AGB03596.1 | PFAM: Methyl-viologen-reducing hydrogenase, delta subunit. (157 aa) | ||||
AGB03597.1 | PFAM: Methyl-coenzyme M reductase beta subunit, C-terminal domain; Methyl-coenzyme M reductase beta subunit, N-terminal domain; TIGRFAM: methyl-coenzyme M reductase, beta subunit. (437 aa) | ||||
AGB03598.1 | PFAM: Methyl-coenzyme M reductase operon protein D; TIGRFAM: methyl-coenzyme M reductase operon protein D. (156 aa) | ||||
AGB03599.1 | PFAM: Methyl-coenzyme M reductase operon protein C; TIGRFAM: methyl-coenzyme M reductase I operon protein C. (211 aa) | ||||
AGB03600.1 | PFAM: Methyl-coenzyme M reductase gamma subunit; TIGRFAM: methyl-coenzyme M reductase, gamma subunit. (255 aa) | ||||
AGB03601.1 | Methyl-coenzyme M reductase, alpha subunit; Component of the methyl-coenzyme M reductase (MCR) I that catalyzes the reductive cleavage of methyl-coenzyme M (CoM-S-CH3 or 2- (methylthio)ethanesulfonate) using coenzyme B (CoB or 7- mercaptoheptanoylthreonine phosphate) as reductant which results in the production of methane and the mixed heterodisulfide of CoB and CoM (CoM-S-S-CoB). This is the final step in methanogenesis. (562 aa) | ||||
mtrE | N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (299 aa) | ||||
mtrD | N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (278 aa) | ||||
mtrC | N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (282 aa) | ||||
mtrB | Tetrahydromethanopterin S-methyltransferase, subunit B; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (97 aa) | ||||
mtrA | N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family. (240 aa) | ||||
AGB03611.1 | PFAM: Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF); TIGRFAM: tetrahydromethanopterin S-methyltransferase, F subunit; manually curated. (67 aa) | ||||
mtrA-2 | Tetrahydromethanopterin S-methyltransferase subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family. (245 aa) | ||||
AGB03613.1 | PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit; TIGRFAM: N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H. (345 aa) | ||||
mtd | Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. (279 aa) | ||||
mer | 5,10-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family. (328 aa) | ||||
AGB03682.1 | Putative kinase, aspartokinase/uridylate kinase. (204 aa) | ||||
AGB03698.1 | PFAM: Nickel-dependent hydrogenase; TIGRFAM: coenzyme F420 hydrogenase, subunit alpha; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (455 aa) | ||||
AGB03699.1 | PFAM: Hydrogenase maturation protease; TIGRFAM: coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit); hydrogenase maturation protease. (176 aa) | ||||
AGB03700.1 | Coenzyme F420 hydrogenase, subunit gamma; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; 4Fe-4S binding domain; TIGRFAM: coenzyme F420 hydrogenase, subunit gamma. (287 aa) | ||||
AGB03701.1 | PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; TIGRFAM: coenzyme F420 hydrogenase, subunit beta. (308 aa) | ||||
AGB03879.1 | Dihydropteroate synthase-like enzyme; TIGRFAM: dihydropteroate synthase-related protein. (470 aa) |