STRINGSTRING
AGB01445.1 AGB01445.1 mfnB mfnB AGB02315.1 AGB02315.1 AGB02737.1 AGB02737.1 AGB02900.1 AGB02900.1 AGB02901.1 AGB02901.1 AGB02987.1 AGB02987.1 mch mch ftr ftr AGB03682.1 AGB03682.1 AGB03879.1 AGB03879.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGB01445.1beta-RFAP synthase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; Protein of unknown function (DUF98); TIGRFAM: beta-RFAP synthase. (510 aa)
mfnBHypothetical protein; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P). (228 aa)
AGB02315.1hisA/hisF family protein; PFAM: Histidine biosynthesis protein; TIGRFAM: hisA/hisF family protein; Belongs to the HisA/HisF family. (223 aa)
AGB02737.1Putative sugar kinase; PFAM: GHMP kinases N terminal domain; TIGRFAM: beta-RFAP synthase. (359 aa)
AGB02900.1Putative ATP-utilizing enzyme (ATP-grasp superfamily); PFAM: ATP-grasp domain. (295 aa)
AGB02901.1PFAM: Hydantoinase/oxoprolinase; TIGRFAM: probable H4MPT-linked C1 transfer pathway protein. (313 aa)
AGB02987.1PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase. (296 aa)
mchMethenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. (314 aa)
ftrFormylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family. (294 aa)
AGB03682.1Putative kinase, aspartokinase/uridylate kinase. (204 aa)
AGB03879.1Dihydropteroate synthase-like enzyme; TIGRFAM: dihydropteroate synthase-related protein. (470 aa)
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.