STRINGSTRING
mch mch AGB01693.1 AGB01693.1 AGB01697.1 AGB01697.1 AGB01715.1 AGB01715.1 AGB01719.1 AGB01719.1 AGB01742.1 AGB01742.1 AGB01746.1 AGB01746.1 AGB01923.1 AGB01923.1 AGB02987.1 AGB02987.1 ftr ftr AGB03591.1 AGB03591.1 mtrD mtrD mtrC mtrC mtrB mtrB mtrA mtrA AGB03611.1 AGB03611.1 AGB03613.1 AGB03613.1 mtd mtd mer mer
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mchMethenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. (314 aa)
AGB01693.1NADH:ubiquinone oxidoreductase chain I-like protein; PFAM: 4Fe-4S binding domain. (87 aa)
AGB01697.1PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C. (266 aa)
AGB01715.1PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C. (268 aa)
AGB01719.1NADH:ubiquinone oxidoreductase chain I-like protein; PFAM: 4Fe-4S binding domain. (87 aa)
AGB01742.1Dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit; PFAM: 4Fe-4S binding domain. (86 aa)
AGB01746.1PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C. (266 aa)
AGB01923.1Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase; PFAM: H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase; TIGRFAM: 5,10-methenyltetrahydromethanopterin hydrogenase. (345 aa)
AGB02987.1PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase. (296 aa)
ftrFormylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family. (294 aa)
AGB03591.1Hypothetical protein; Manually curated. (88 aa)
mtrDN5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (278 aa)
mtrCN5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (282 aa)
mtrBTetrahydromethanopterin S-methyltransferase, subunit B; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (97 aa)
mtrAN5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family. (240 aa)
AGB03611.1PFAM: Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF); TIGRFAM: tetrahydromethanopterin S-methyltransferase, F subunit; manually curated. (67 aa)
AGB03613.1PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit; TIGRFAM: N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H. (345 aa)
mtdCoenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. (279 aa)
mer5,10-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family. (328 aa)
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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