STRINGSTRING
atpE-2 atpE-2 atpE atpE atpC atpC AGB01338.1 AGB01338.1 atpA atpA atpB atpB atpD atpD AGB01344.1 AGB01344.1 AGB01387.1 AGB01387.1 atpC-2 atpC-2 atpF atpF atpA-2 atpA-2 atpB-2 atpB-2 atpD-2 atpD-2 AGB01494.1 AGB01494.1 hpt hpt AGB02125.1 AGB02125.1 psmA psmA AGB02230.1 AGB02230.1 AGB02557.1 AGB02557.1 AGB02568.1 AGB02568.1 pan pan AGB02649.1 AGB02649.1 serS serS psmB psmB AGB02862.1 AGB02862.1 alaS alaS AGB03377.1 AGB03377.1 tuf tuf AGB03552.1 AGB03552.1 AGB03560.1 AGB03560.1 AGB03777.1 AGB03777.1 AGB03782.1 AGB03782.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atpE-2Archaeal/vacuolar-type H+-ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane. (192 aa)
atpEArchaeal/vacuolar-type H+-ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane. (194 aa)
atpCArchaeal/vacuolar-type H+-ATPase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane. (357 aa)
AGB01338.1PFAM: ATP synthase (F/14-kDa) subunit. (106 aa)
atpAArchaeal/vacuolar-type H+-ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (582 aa)
atpBArchaeal/vacuolar-type H+-ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (475 aa)
atpDH(+)-transporting ATP synthase, vacuolar type, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (225 aa)
AGB01344.1PFAM: V-type ATPase 116kDa subunit family; Belongs to the V-ATPase 116 kDa subunit family. (645 aa)
AGB01387.1PFAM: V-type ATPase 116kDa subunit family; Belongs to the V-ATPase 116 kDa subunit family. (675 aa)
atpC-2ATP synthase A1, C subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (351 aa)
atpFArchaeal/vacuolar-type H+-ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane. (101 aa)
atpA-2ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (587 aa)
atpB-2ATP synthase, B subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (462 aa)
atpD-2H(+)-transporting ATP synthase, vacuolar type, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (209 aa)
AGB01494.1Sulfate adenylyltransferase, large subunit; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; manually curated; non-canonical start codon. (537 aa)
hptPRPP-binding protein, adenine/guanine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis. Belongs to the purine/pyrimidine phosphoribosyltransferase family. Archaeal HPRT subfamily. (182 aa)
AGB02125.1Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family. (157 aa)
psmAProteasome endopeptidase complex, archaeal, alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (240 aa)
AGB02230.1Hypothetical protein. (139 aa)
AGB02557.1Putative ATPase, Rnase L inhibitor (RLI) like protein; PFAM: ABC transporter; 4Fe-4S binding domain; Possible metal-binding domain in RNase L inhibitor, RLI. (590 aa)
AGB02568.126S proteasome subunit P45 family; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: 26S proteasome subunit P45 family; Belongs to the AAA ATPase family. (386 aa)
pan26S proteasome subunit P45 family; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-2 [...] (436 aa)
AGB02649.1Hypothetical protein. (146 aa)
serSseryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (425 aa)
psmBProteasome endopeptidase complex, archaeal, beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (213 aa)
AGB02862.1PFAM: Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (332 aa)
alaSalanine--tRNA ligase/alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (913 aa)
AGB03377.1DGQHR domain-containing protein; TIGRFAM: DGQHR domain. (480 aa)
tufTranslation elongation factor EF-1 alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (425 aa)
AGB03552.1Uncharacterized protein with SCP/PR1 domains; PFAM: Cysteine-rich secretory protein family. (332 aa)
AGB03560.1PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase. (421 aa)
AGB03777.1Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family. (160 aa)
AGB03782.1Hypothetical protein. (90 aa)
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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