STRINGSTRING
AGB02524.1 AGB02524.1 AGB01471.1 AGB01471.1 AGB01792.1 AGB01792.1 AGB01803.1 AGB01803.1 AGB01804.1 AGB01804.1 AGB01856.1 AGB01856.1 AGB01873.1 AGB01873.1 AGB02186.1 AGB02186.1 AGB02428.1 AGB02428.1 AGB02628.1 AGB02628.1 AGB02802.1 AGB02802.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGB02524.1PDK repeat-containing protein; PFAM: PKD domain. (1045 aa)
AGB01471.1PDK repeat-containing protein; PFAM: PKD domain. (490 aa)
AGB01792.1PDK repeat-containing protein; PFAM: PKD domain. (826 aa)
AGB01803.1PDK repeat-containing protein; PFAM: PKD domain. (2149 aa)
AGB01804.1PDK repeat-containing protein; PFAM: PKD domain. (543 aa)
AGB01856.1PDK repeat-containing protein; PFAM: Protein of unknown function (DUF1628); PKD domain. (602 aa)
AGB01873.1PDK repeat-containing protein; PFAM: Protein of unknown function (DUF3344); PKD domain; CARDB; Domain of unknown function (DUF2341). (2897 aa)
AGB02186.1PDK repeat-containing protein; PFAM: PKD domain. (755 aa)
AGB02428.1PDK repeat-containing protein; PFAM: Peptidase family M50; PKD domain. (534 aa)
AGB02628.1Hypothetical protein; PFAM: LVIVD repeat; PKD domain. (1522 aa)
AGB02802.1PDK repeat-containing protein; PFAM: PKD domain. (1941 aa)
Your Current Organism:
Methanoregula formicica
NCBI taxonomy Id: 593750
Other names: M. formicica SMSP, Methanomicrobiales archaeon SMSP, Methanoregula formicica SMSP, Methanoregula formicica str. SMSP, Methanoregula formicica strain SMSP
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