8 items (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SF3B1	Splicing factor 3b subunit 1. (1304 aa)
	SF3A3	Splicing factor 3a subunit 3. (501 aa)
	SF3A1	Splicing factor 3a subunit 1. (793 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (129 aa)
	SF3B2	Splicing factor 3b subunit 2. (896 aa)
	DDX46	DEAD-box helicase 46. (1033 aa)
	SNRPA1	Small nuclear ribonucleoprotein polypeptide A. (250 aa)
	SF3B3	Splicing factor 3b subunit 3. (1216 aa)

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX46	SF3A1	ENSMLUP00000011486	ENSMLUP00000001954	DEAD-box helicase 46.	Splicing factor 3a subunit 1.	0.999
DDX46	SF3A3	ENSMLUP00000011486	ENSMLUP00000000902	DEAD-box helicase 46.	Splicing factor 3a subunit 3.	0.999
DDX46	SF3B1	ENSMLUP00000011486	ENSMLUP00000000782	DEAD-box helicase 46.	Splicing factor 3b subunit 1.	0.999
DDX46	SF3B2	ENSMLUP00000011486	ENSMLUP00000010170	DEAD-box helicase 46.	Splicing factor 3b subunit 2.	0.995
DDX46	SF3B3	ENSMLUP00000011486	ENSMLUP00000013298	DEAD-box helicase 46.	Splicing factor 3b subunit 3.	0.999
DDX46	SNRPA1	ENSMLUP00000011486	ENSMLUP00000012928	DEAD-box helicase 46.	Small nuclear ribonucleoprotein polypeptide A.	0.998
DDX46	SNRPD1	ENSMLUP00000011486	ENSMLUP00000008302	DEAD-box helicase 46.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.998
SF3A1	DDX46	ENSMLUP00000001954	ENSMLUP00000011486	Splicing factor 3a subunit 1.	DEAD-box helicase 46.	0.999
SF3A1	SF3A3	ENSMLUP00000001954	ENSMLUP00000000902	Splicing factor 3a subunit 1.	Splicing factor 3a subunit 3.	0.999
SF3A1	SF3B1	ENSMLUP00000001954	ENSMLUP00000000782	Splicing factor 3a subunit 1.	Splicing factor 3b subunit 1.	0.998
SF3A1	SF3B2	ENSMLUP00000001954	ENSMLUP00000010170	Splicing factor 3a subunit 1.	Splicing factor 3b subunit 2.	0.999
SF3A1	SF3B3	ENSMLUP00000001954	ENSMLUP00000013298	Splicing factor 3a subunit 1.	Splicing factor 3b subunit 3.	0.999
SF3A1	SNRPA1	ENSMLUP00000001954	ENSMLUP00000012928	Splicing factor 3a subunit 1.	Small nuclear ribonucleoprotein polypeptide A.	0.999
SF3A1	SNRPD1	ENSMLUP00000001954	ENSMLUP00000008302	Splicing factor 3a subunit 1.	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.997
SF3A3	DDX46	ENSMLUP00000000902	ENSMLUP00000011486	Splicing factor 3a subunit 3.	DEAD-box helicase 46.	0.999
SF3A3	SF3A1	ENSMLUP00000000902	ENSMLUP00000001954	Splicing factor 3a subunit 3.	Splicing factor 3a subunit 1.	0.999
SF3A3	SF3B1	ENSMLUP00000000902	ENSMLUP00000000782	Splicing factor 3a subunit 3.	Splicing factor 3b subunit 1.	0.998
SF3A3	SF3B2	ENSMLUP00000000902	ENSMLUP00000010170	Splicing factor 3a subunit 3.	Splicing factor 3b subunit 2.	0.999
SF3A3	SF3B3	ENSMLUP00000000902	ENSMLUP00000013298	Splicing factor 3a subunit 3.	Splicing factor 3b subunit 3.	0.999
SF3A3	SNRPA1	ENSMLUP00000000902	ENSMLUP00000012928	Splicing factor 3a subunit 3.	Small nuclear ribonucleoprotein polypeptide A.	0.999