5 items (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GNA13	G protein subunit alpha 13. (284 aa)
	AKAP13	A-kinase anchoring protein 13. (2797 aa)
	ARHGEF1	Rho guanine nucleotide exchange factor 1. (779 aa)
	G1PRL6_MYOLU	Uncharacterized protein. (263 aa)
	LOC102430746	Uncharacterized protein. (193 aa)

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAP13	ARHGEF1	ENSMLUP00000007954	ENSMLUP00000011779	A-kinase anchoring protein 13.	Rho guanine nucleotide exchange factor 1.	0.893
AKAP13	G1PRL6_MYOLU	ENSMLUP00000007954	ENSMLUP00000013787	A-kinase anchoring protein 13.	Uncharacterized protein.	0.921
AKAP13	GNA13	ENSMLUP00000007954	ENSMLUP00000000083	A-kinase anchoring protein 13.	G protein subunit alpha 13.	0.936
AKAP13	LOC102430746	ENSMLUP00000007954	ENSMLUP00000018159	A-kinase anchoring protein 13.	Uncharacterized protein.	0.939
ARHGEF1	AKAP13	ENSMLUP00000011779	ENSMLUP00000007954	Rho guanine nucleotide exchange factor 1.	A-kinase anchoring protein 13.	0.893
ARHGEF1	G1PRL6_MYOLU	ENSMLUP00000011779	ENSMLUP00000013787	Rho guanine nucleotide exchange factor 1.	Uncharacterized protein.	0.966
ARHGEF1	GNA13	ENSMLUP00000011779	ENSMLUP00000000083	Rho guanine nucleotide exchange factor 1.	G protein subunit alpha 13.	0.998
ARHGEF1	LOC102430746	ENSMLUP00000011779	ENSMLUP00000018159	Rho guanine nucleotide exchange factor 1.	Uncharacterized protein.	0.934
G1PRL6_MYOLU	AKAP13	ENSMLUP00000013787	ENSMLUP00000007954	Uncharacterized protein.	A-kinase anchoring protein 13.	0.921
G1PRL6_MYOLU	ARHGEF1	ENSMLUP00000013787	ENSMLUP00000011779	Uncharacterized protein.	Rho guanine nucleotide exchange factor 1.	0.966
G1PRL6_MYOLU	GNA13	ENSMLUP00000013787	ENSMLUP00000000083	Uncharacterized protein.	G protein subunit alpha 13.	0.979
G1PRL6_MYOLU	LOC102430746	ENSMLUP00000013787	ENSMLUP00000018159	Uncharacterized protein.	Uncharacterized protein.	0.843
GNA13	AKAP13	ENSMLUP00000000083	ENSMLUP00000007954	G protein subunit alpha 13.	A-kinase anchoring protein 13.	0.936
GNA13	ARHGEF1	ENSMLUP00000000083	ENSMLUP00000011779	G protein subunit alpha 13.	Rho guanine nucleotide exchange factor 1.	0.998
GNA13	G1PRL6_MYOLU	ENSMLUP00000000083	ENSMLUP00000013787	G protein subunit alpha 13.	Uncharacterized protein.	0.979
GNA13	LOC102430746	ENSMLUP00000000083	ENSMLUP00000018159	G protein subunit alpha 13.	Uncharacterized protein.	0.885
LOC102430746	AKAP13	ENSMLUP00000018159	ENSMLUP00000007954	Uncharacterized protein.	A-kinase anchoring protein 13.	0.939
LOC102430746	ARHGEF1	ENSMLUP00000018159	ENSMLUP00000011779	Uncharacterized protein.	Rho guanine nucleotide exchange factor 1.	0.934
LOC102430746	G1PRL6_MYOLU	ENSMLUP00000018159	ENSMLUP00000013787	Uncharacterized protein.	Uncharacterized protein.	0.843
LOC102430746	GNA13	ENSMLUP00000018159	ENSMLUP00000000083	Uncharacterized protein.	G protein subunit alpha 13.	0.885