50 items (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102438801	Uncharacterized protein. (429 aa)
	LOC102439237	Uncharacterized protein. (557 aa)
	SF3B1	Splicing factor 3b subunit 1. (1304 aa)
	L7N0Z8_MYOLU	Uncharacterized protein. (427 aa)
	SF3A3	Splicing factor 3a subunit 3. (501 aa)
	DDX39B	DExD-box helicase 39B. (311 aa)
	CELF4	CUGBP Elav-like family member 4. (371 aa)
	SF3A1	Splicing factor 3a subunit 1. (793 aa)
	CELF3	CUGBP Elav-like family member 3. (452 aa)
	SNRPC	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
	PTBP2	Polypyrimidine tract binding protein 2. (561 aa)
	GEMIN2	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (264 aa)
	SRPK2	SRSF protein kinase 2. (691 aa)
	SLU7	SLU7 homolog, splicing factor. (586 aa)
	SF3A2	Matrin-type domain-containing protein. (442 aa)
	AMH	Anti-Mullerian hormone. (568 aa)
	SRPK3	SRSF protein kinase 3. (565 aa)
	SETX	Senataxin. (2658 aa)
	USP39	Ubiquitin specific peptidase 39. (567 aa)
	LUC7L3	Uncharacterized protein. (435 aa)
	CELF2	CUGBP Elav-like family member 2. (508 aa)
	G1P738_MYOLU	Uncharacterized protein. (401 aa)
	PRPF39	Pre-mRNA processing factor 39. (667 aa)
	DDX39A	Uncharacterized protein. (436 aa)
	G1QEQ4_MYOLU	Uncharacterized protein. (54 aa)
	KHDC4	KH domain containing 4, pre-mRNA splicing factor. (620 aa)
	SRPK1	SRSF protein kinase 1. (642 aa)
	SRSF1	Uncharacterized protein. (248 aa)
	NOL3	Nucleolar protein 3. (269 aa)
	SFSWAP	Splicing factor SWAP. (897 aa)
	LOC102432003	Uncharacterized protein. (284 aa)
	G1PLB2_MYOLU	GCFC domain-containing protein. (603 aa)
	G1QAT9_MYOLU	Uncharacterized protein. (427 aa)
	G1PLV7_MYOLU	Uncharacterized protein. (513 aa)
	FMC1-LUC7L2	FMC1-LUC7L2 readthrough. (458 aa)
	GEMIN6	Gem nuclear organelle associated protein 6. (166 aa)
	NCBP1	Nuclear cap binding protein subunit 1. (779 aa)
	SCAF11	SR-related CTD associated factor 11. (1461 aa)
	YTHDC1	YTH domain containing 1. (714 aa)
	CRNKL1	Crooked neck pre-mRNA splicing factor 1. (772 aa)
	SRSF6	Serine and arginine rich splicing factor 6. (345 aa)
	CELF1	CUGBP Elav-like family member 1. (517 aa)
	PSIP1	PC4 and SFRS1 interacting protein 1. (504 aa)
	G1QA11_MYOLU	Uncharacterized protein. (427 aa)
	LUC7L	LUC7 like. (367 aa)
	PRPF19	Pre-mRNA processing factor 19. (519 aa)
	G1PYR6_MYOLU	GCFC domain-containing protein. (598 aa)
	CELF6	Uncharacterized protein. (461 aa)
	G1Q215_MYOLU	SF3A2 domain-containing protein. (360 aa)
	G1Q3L1_MYOLU	Uncharacterized protein. (419 aa)

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMH	G1Q215_MYOLU	ENSMLUP00000004035	ENSMLUP00000017748	Anti-Mullerian hormone.	SF3A2 domain-containing protein.	0.510
AMH	SF3A2	ENSMLUP00000004035	ENSMLUP00000004030	Anti-Mullerian hormone.	Matrin-type domain-containing protein.	0.557
CELF1	PTBP2	ENSMLUP00000015162	ENSMLUP00000002293	CUGBP Elav-like family member 1.	Polypyrimidine tract binding protein 2.	0.533
CELF1	SRSF1	ENSMLUP00000015162	ENSMLUP00000010054	CUGBP Elav-like family member 1.	Uncharacterized protein.	0.419
CELF2	PTBP2	ENSMLUP00000005296	ENSMLUP00000002293	CUGBP Elav-like family member 2.	Polypyrimidine tract binding protein 2.	0.616
CELF3	PTBP2	ENSMLUP00000002002	ENSMLUP00000002293	CUGBP Elav-like family member 3.	Polypyrimidine tract binding protein 2.	0.570
CELF3	SRSF1	ENSMLUP00000002002	ENSMLUP00000010054	CUGBP Elav-like family member 3.	Uncharacterized protein.	0.504
CELF4	PTBP2	ENSMLUP00000001605	ENSMLUP00000002293	CUGBP Elav-like family member 4.	Polypyrimidine tract binding protein 2.	0.570
CELF4	SRSF1	ENSMLUP00000001605	ENSMLUP00000010054	CUGBP Elav-like family member 4.	Uncharacterized protein.	0.504
CRNKL1	DDX39A	ENSMLUP00000015058	ENSMLUP00000008458	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.586
CRNKL1	DDX39B	ENSMLUP00000015058	ENSMLUP00000001542	Crooked neck pre-mRNA splicing factor 1.	DExD-box helicase 39B.	0.586
CRNKL1	G1Q215_MYOLU	ENSMLUP00000015058	ENSMLUP00000017748	Crooked neck pre-mRNA splicing factor 1.	SF3A2 domain-containing protein.	0.935
CRNKL1	G1Q3L1_MYOLU	ENSMLUP00000015058	ENSMLUP00000018294	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.586
CRNKL1	G1QA11_MYOLU	ENSMLUP00000015058	ENSMLUP00000020544	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.586
CRNKL1	G1QAT9_MYOLU	ENSMLUP00000015058	ENSMLUP00000020822	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.586
CRNKL1	G1QEQ4_MYOLU	ENSMLUP00000015058	ENSMLUP00000022187	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.430
CRNKL1	L7N0Z8_MYOLU	ENSMLUP00000015058	ENSMLUP00000000850	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.586
CRNKL1	LOC102432003	ENSMLUP00000015058	ENSMLUP00000010753	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.999
CRNKL1	LOC102438801	ENSMLUP00000015058	ENSMLUP00000018810	Crooked neck pre-mRNA splicing factor 1.	Uncharacterized protein.	0.586
CRNKL1	NCBP1	ENSMLUP00000015058	ENSMLUP00000013854	Crooked neck pre-mRNA splicing factor 1.	Nuclear cap binding protein subunit 1.	0.451