24 items (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GGNBP2	Gametogenetin binding protein 2. (699 aa)
	LOC102437524	Hexosyltransferase. (330 aa)
	LOC102433357	Uncharacterized protein. (309 aa)
	B3GALT4	Hexosyltransferase. (384 aa)
	LOC102437880	Hexosyltransferase. (311 aa)
	G1QA34_MYOLU	Uncharacterized protein. (359 aa)
	G1Q8Z0_MYOLU	Uncharacterized protein. (269 aa)
	B3GALT2	Hexosyltransferase. (417 aa)
	LOC102417244	Hexosyltransferase. (311 aa)
	COG3	Component of oligomeric golgi complex 3. (833 aa)
	B4GALT1	Beta-1,4-galactosyltransferase 1. (397 aa)
	B3GALT1	Hexosyltransferase. (326 aa)
	B4GALT5	Beta-1,4-galactosyltransferase 5. (361 aa)
	LOC102418670	Uncharacterized protein. (366 aa)
	B4GALT4	Beta-1,4-galactosyltransferase 4. (344 aa)
	B4GALT7	Beta-1,4-galactosyltransferase 7. (327 aa)
	LALBA	Lactalbumin alpha; Belongs to the glycosyl hydrolase 22 family. (141 aa)
	PLOD3	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (742 aa)
	UGT8	UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family. (540 aa)
	COLGALT2	Uncharacterized protein. (542 aa)
	B4GALT3	Beta-1,4-galactosyltransferase 3. (398 aa)
	COLGALT1	Collagen beta(1-O)galactosyltransferase 1. (628 aa)
	B4GALT6	Beta-1,4-galactosyltransferase 6. (382 aa)
	B3GALNT1	Hexosyltransferase. (331 aa)

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3GALNT1	B4GALT1	ENSMLUP00000002972	ENSMLUP00000014671	Hexosyltransferase.	Beta-1,4-galactosyltransferase 1.	0.858
B3GALNT1	B4GALT3	ENSMLUP00000002972	ENSMLUP00000004147	Hexosyltransferase.	Beta-1,4-galactosyltransferase 3.	0.770
B3GALNT1	B4GALT4	ENSMLUP00000002972	ENSMLUP00000010865	Hexosyltransferase.	Beta-1,4-galactosyltransferase 4.	0.897
B3GALNT1	B4GALT5	ENSMLUP00000002972	ENSMLUP00000011917	Hexosyltransferase.	Beta-1,4-galactosyltransferase 5.	0.518
B3GALNT1	B4GALT6	ENSMLUP00000002972	ENSMLUP00000003323	Hexosyltransferase.	Beta-1,4-galactosyltransferase 6.	0.523
B3GALNT1	G1Q8Z0_MYOLU	ENSMLUP00000002972	ENSMLUP00000020173	Hexosyltransferase.	Uncharacterized protein.	0.770
B3GALNT1	G1QA34_MYOLU	ENSMLUP00000002972	ENSMLUP00000020567	Hexosyltransferase.	Uncharacterized protein.	0.770
B3GALNT1	LOC102418670	ENSMLUP00000002972	ENSMLUP00000011158	Hexosyltransferase.	Uncharacterized protein.	0.845
B3GALT1	B3GALT2	ENSMLUP00000012496	ENSMLUP00000019098	Hexosyltransferase.	Hexosyltransferase.	0.874
B3GALT1	B4GALT1	ENSMLUP00000012496	ENSMLUP00000014671	Hexosyltransferase.	Beta-1,4-galactosyltransferase 1.	0.894
B3GALT1	B4GALT3	ENSMLUP00000012496	ENSMLUP00000004147	Hexosyltransferase.	Beta-1,4-galactosyltransferase 3.	0.859
B3GALT1	B4GALT4	ENSMLUP00000012496	ENSMLUP00000010865	Hexosyltransferase.	Beta-1,4-galactosyltransferase 4.	0.892
B3GALT1	B4GALT5	ENSMLUP00000012496	ENSMLUP00000011917	Hexosyltransferase.	Beta-1,4-galactosyltransferase 5.	0.438
B3GALT1	B4GALT6	ENSMLUP00000012496	ENSMLUP00000003323	Hexosyltransferase.	Beta-1,4-galactosyltransferase 6.	0.603
B3GALT1	G1Q8Z0_MYOLU	ENSMLUP00000012496	ENSMLUP00000020173	Hexosyltransferase.	Uncharacterized protein.	0.859
B3GALT1	G1QA34_MYOLU	ENSMLUP00000012496	ENSMLUP00000020567	Hexosyltransferase.	Uncharacterized protein.	0.859
B3GALT1	LOC102418670	ENSMLUP00000012496	ENSMLUP00000011158	Hexosyltransferase.	Uncharacterized protein.	0.877
B3GALT2	B3GALT1	ENSMLUP00000019098	ENSMLUP00000012496	Hexosyltransferase.	Hexosyltransferase.	0.874
B3GALT2	B3GALT4	ENSMLUP00000019098	ENSMLUP00000021574	Hexosyltransferase.	Hexosyltransferase.	0.695
B3GALT2	B4GALT1	ENSMLUP00000019098	ENSMLUP00000014671	Hexosyltransferase.	Beta-1,4-galactosyltransferase 1.	0.912