STRINGSTRING
LSM3 LSM3 SF3B1 SF3B1 SF3A3 SF3A3 PRPF38A PRPF38A SNRPD2 SNRPD2 WBP4 WBP4 SF3A1 SF3A1 PHF5A PHF5A SNU13 SNU13 PRPF8 PRPF8 G1NZJ7_MYOLU G1NZJ7_MYOLU CWC27 CWC27 LSM4 LSM4 SF3A2 SF3A2 AMH AMH LOC102439968 LOC102439968 LSM8 LSM8 G1PAL4_MYOLU G1PAL4_MYOLU SNRPB2 SNRPB2 SF3B5 SF3B5 G1PBU8_MYOLU G1PBU8_MYOLU DHX16 DHX16 TXNL4A TXNL4A SNRNP200 SNRNP200 G1PGR0_MYOLU G1PGR0_MYOLU SART1 SART1 SF3B2 SF3B2 EFTUD2 EFTUD2 MFAP1 MFAP1 LSM7 LSM7 CWC22 CWC22 BUD13 BUD13 SNRPA1 SNRPA1 SF3B3 SF3B3 SRRM2 SRRM2 PRPF4 PRPF4 SMU1 SMU1 PRPF31 PRPF31 SNRPB SNRPB SNIP1 SNIP1 ZMAT2 ZMAT2 G1PXW2_MYOLU G1PXW2_MYOLU G1Q0X5_MYOLU G1Q0X5_MYOLU G1Q215_MYOLU G1Q215_MYOLU G1Q3Z3_MYOLU G1Q3Z3_MYOLU LOC102430876 LOC102430876 G1Q6G4_MYOLU G1Q6G4_MYOLU SNRPD2-2 SNRPD2-2 SNRPD2-3 SNRPD2-3 G1QBV3_MYOLU G1QBV3_MYOLU LSM8-2 LSM8-2 LOC102421678 LOC102421678 SNRPD2-4 SNRPD2-4 SNRPD2-5 SNRPD2-5 G1QDV2_MYOLU G1QDV2_MYOLU LSM3-2 LSM3-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
SF3A3Splicing factor 3a subunit 3. (501 aa)
PRPF38APRP38_assoc domain-containing protein. (313 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
WBP4WW domain binding protein 4. (372 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
PHF5APHD finger protein 5A. (110 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
PRPF8Pre-mRNA processing factor 8. (2338 aa)
G1NZJ7_MYOLUWD_REPEATS_REGION domain-containing protein. (869 aa)
CWC27CWC27 spliceosome associated cyclophilin. (313 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
SF3A2Matrin-type domain-containing protein. (442 aa)
AMHAnti-Mullerian hormone. (568 aa)
LOC102439968PWI domain-containing protein. (684 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
G1PAL4_MYOLUFHA domain-containing protein. (381 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
G1PBU8_MYOLUWD_REPEATS_REGION domain-containing protein. (535 aa)
DHX16DEAH-box helicase 16. (1035 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
SNRNP200Uncharacterized protein. (2139 aa)
G1PGR0_MYOLUSplicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (806 aa)
SF3B2Splicing factor 3b subunit 2. (896 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (974 aa)
MFAP1Microfibril associated protein 1. (438 aa)
LSM7Sm domain-containing protein. (103 aa)
CWC22CWC22 spliceosome associated protein homolog. (839 aa)
BUD13Uncharacterized protein. (665 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (250 aa)
SF3B3Splicing factor 3b subunit 3. (1216 aa)
SRRM2Serine/arginine repetitive matrix 2. (2590 aa)
PRPF4WD_REPEATS_REGION domain-containing protein. (537 aa)
SMU1Uncharacterized protein. (513 aa)
PRPF31Pre-mRNA processing factor 31. (499 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (235 aa)
SNIP1FHA domain-containing protein. (398 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
G1PXW2_MYOLUSm domain-containing protein. (108 aa)
G1Q0X5_MYOLUUncharacterized protein. (513 aa)
G1Q215_MYOLUSF3A2 domain-containing protein. (360 aa)
G1Q3Z3_MYOLUUncharacterized protein. (2136 aa)
LOC102430876MI domain-containing protein. (795 aa)
G1Q6G4_MYOLUUncharacterized protein. (623 aa)
SNRPD2-2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SNRPD2-3Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
G1QBV3_MYOLUWD_REPEATS_REGION domain-containing protein. (324 aa)
LSM8-2U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
LOC102421678Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SNRPD2-4Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
SNRPD2-5Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (121 aa)
G1QDV2_MYOLUUncharacterized protein. (567 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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