STRINGSTRING
SNRPB SNRPB PRPF38A PRPF38A SNRPD2 SNRPD2 WBP4 WBP4 SF3A1 SF3A1 G1NZJ7_MYOLU G1NZJ7_MYOLU CWC27 CWC27 SF3A2 SF3A2 G1PAL4_MYOLU G1PAL4_MYOLU SF3B5 SF3B5 DHX16 DHX16 TXNL4A TXNL4A G1PFL0_MYOLU G1PFL0_MYOLU SNRNP200 SNRNP200 G1PGR0_MYOLU G1PGR0_MYOLU LOC102441456 LOC102441456 MFAP1 MFAP1 SRRM2 SRRM2 G1PSU5_MYOLU G1PSU5_MYOLU SMU1 SMU1 G1PVF9_MYOLU G1PVF9_MYOLU RBMX2 RBMX2 SNIP1 SNIP1 ZMAT2 ZMAT2 G1Q0X5_MYOLU G1Q0X5_MYOLU G1Q215_MYOLU G1Q215_MYOLU G1Q3Z3_MYOLU G1Q3Z3_MYOLU SNRPD2-2 SNRPD2-2 G1Q7I1_MYOLU G1Q7I1_MYOLU SNRPD2-3 SNRPD2-3 G1QBV3_MYOLU G1QBV3_MYOLU LOC102421678 LOC102421678 SNRPD2-4 SNRPD2-4 SNRPD2-5 SNRPD2-5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNRPBSmall nuclear ribonucleoprotein-associated protein. (235 aa)
PRPF38APRP38_assoc domain-containing protein. (313 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
WBP4WW domain binding protein 4. (372 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
G1NZJ7_MYOLUWD_REPEATS_REGION domain-containing protein. (869 aa)
CWC27CWC27 spliceosome associated cyclophilin. (313 aa)
SF3A2Matrin-type domain-containing protein. (442 aa)
G1PAL4_MYOLUFHA domain-containing protein. (381 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
DHX16DEAH-box helicase 16. (1035 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
G1PFL0_MYOLURRM domain-containing protein. (333 aa)
SNRNP200Uncharacterized protein. (2139 aa)
G1PGR0_MYOLUSplicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LOC102441456Uncharacterized protein. (343 aa)
MFAP1Microfibril associated protein 1. (438 aa)
SRRM2Serine/arginine repetitive matrix 2. (2590 aa)
G1PSU5_MYOLUUncharacterized protein. (104 aa)
SMU1Uncharacterized protein. (513 aa)
G1PVF9_MYOLUUncharacterized protein. (348 aa)
RBMX2RRM domain-containing protein. (333 aa)
SNIP1FHA domain-containing protein. (398 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
G1Q0X5_MYOLUUncharacterized protein. (513 aa)
G1Q215_MYOLUSF3A2 domain-containing protein. (360 aa)
G1Q3Z3_MYOLUUncharacterized protein. (2136 aa)
SNRPD2-2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
G1Q7I1_MYOLURRM domain-containing protein. (174 aa)
SNRPD2-3Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
G1QBV3_MYOLUWD_REPEATS_REGION domain-containing protein. (324 aa)
LOC102421678Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SNRPD2-4Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
SNRPD2-5Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (121 aa)
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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