STRINGSTRING
RBMX2 RBMX2 LSM5 LSM5 SNRPB SNRPB SF3A2 SF3A2 LSM4 LSM4 PDE6C PDE6C PRPF8 PRPF8 TSNAX TSNAX PRPF4 PRPF4 SNRPA1 SNRPA1 SNRPF SNRPF SNRPE SNRPE LSM7 LSM7 SNRNP70 SNRNP70 RBM42 RBM42 SF3B2 SF3B2 DDX23 DDX23 LSM3 LSM3 SNRNP200 SNRNP200 G1PFL0_MYOLU G1PFL0_MYOLU SNRPD3 SNRPD3 DDX39A DDX39A HTATSF1 HTATSF1 TXNL4A TXNL4A ZNF608 ZNF608 G1PBU8_MYOLU G1PBU8_MYOLU SNRPB2 SNRPB2 SART3 SART3 LSM8 LSM8 CD2BP2 CD2BP2 PRPF40B PRPF40B USP39 USP39 CCDC84 CCDC84 LOC102439968 LOC102439968 SF3B6 SF3B6 SF3A1 SF3A1 TRMT13 TRMT13 DDX39B DDX39B SNRPD2 SNRPD2 L7N0Z8_MYOLU L7N0Z8_MYOLU SF3B1 SF3B1 SNRPA SNRPA C19orf54 C19orf54 PPP1R8 PPP1R8 LSM3-2 LSM3-2 LOC102437528 LOC102437528 LOC102434604 LOC102434604 SNRPD2-5 SNRPD2-5 G1QD57_MYOLU G1QD57_MYOLU G1QD04_MYOLU G1QD04_MYOLU SNRPD2-4 SNRPD2-4 LSM8-2 LSM8-2 G1QB86_MYOLU G1QB86_MYOLU G1QAT9_MYOLU G1QAT9_MYOLU G1QAT3_MYOLU G1QAT3_MYOLU G1QAP8_MYOLU G1QAP8_MYOLU CHODL CHODL G1QA11_MYOLU G1QA11_MYOLU LOC102424738 LOC102424738 G1Q9E9_MYOLU G1Q9E9_MYOLU SNRPN SNRPN SNRPD2-3 SNRPD2-3 PPIH PPIH G1Q817_MYOLU G1Q817_MYOLU G1Q7Z0_MYOLU G1Q7Z0_MYOLU G1Q7I1_MYOLU G1Q7I1_MYOLU SNRPD2-2 SNRPD2-2 LSM6 LSM6 RNPC3 RNPC3 C3orf49 C3orf49 LOC102438801 LOC102438801 LOC102435333 LOC102435333 G1Q3Z3_MYOLU G1Q3Z3_MYOLU G1Q3L1_MYOLU G1Q3L1_MYOLU SNRPG SNRPG G1Q215_MYOLU G1Q215_MYOLU G1Q0H1_MYOLU G1Q0H1_MYOLU G1Q015_MYOLU G1Q015_MYOLU G1PXW2_MYOLU G1PXW2_MYOLU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RBMX2RRM domain-containing protein. (333 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (235 aa)
SF3A2Matrin-type domain-containing protein. (442 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
PDE6CPhosphodiesterase. (861 aa)
PRPF8Pre-mRNA processing factor 8. (2338 aa)
TSNAXUncharacterized protein. (292 aa)
PRPF4WD_REPEATS_REGION domain-containing protein. (537 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (250 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (85 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
LSM7Sm domain-containing protein. (103 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (438 aa)
RBM42RNA binding motif protein 42. (477 aa)
SF3B2Splicing factor 3b subunit 2. (896 aa)
DDX23Uncharacterized protein. (818 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
SNRNP200Uncharacterized protein. (2139 aa)
G1PFL0_MYOLURRM domain-containing protein. (333 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
DDX39AUncharacterized protein. (436 aa)
HTATSF1Uncharacterized protein. (722 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
ZNF608Zinc finger protein 608. (1511 aa)
G1PBU8_MYOLUWD_REPEATS_REGION domain-containing protein. (535 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
SART3Spliceosome associated factor 3, U4/U6 recycling protein. (970 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
CD2BP2CD2 cytoplasmic tail binding protein 2. (343 aa)
PRPF40BPre-mRNA processing factor 40 homolog B. (887 aa)
USP39Ubiquitin specific peptidase 39. (567 aa)
CCDC84Coiled-coil domain containing 84. (330 aa)
LOC102439968PWI domain-containing protein. (684 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
TRMT13tRNA methyltransferase 13 homolog. (480 aa)
DDX39BDExD-box helicase 39B. (311 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
L7N0Z8_MYOLUUncharacterized protein. (427 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (288 aa)
C19orf54Chromosome 19 open reading frame 54. (243 aa)
PPP1R8Protein phosphatase 1 regulatory subunit 8. (353 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
LOC102437528annotation not available (106 aa)
LOC102434604Sm domain-containing protein. (106 aa)
SNRPD2-5Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (121 aa)
G1QD57_MYOLUSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
G1QD04_MYOLUSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SNRPD2-4Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
LSM8-2U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
G1QB86_MYOLUSm domain-containing protein. (203 aa)
G1QAT9_MYOLUUncharacterized protein. (427 aa)
G1QAT3_MYOLUUncharacterized protein. (500 aa)
G1QAP8_MYOLUUncharacterized protein. (759 aa)
CHODLChondrolectin. (293 aa)
G1QA11_MYOLUUncharacterized protein. (427 aa)
LOC102424738Sm domain-containing protein. (106 aa)
G1Q9E9_MYOLUSm domain-containing protein. (203 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
SNRPD2-3Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (178 aa)
G1Q817_MYOLUUncharacterized protein. (218 aa)
G1Q7Z0_MYOLUUncharacterized protein. (819 aa)
G1Q7I1_MYOLURRM domain-containing protein. (174 aa)
SNRPD2-2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
RNPC3RNA binding region (RNP1, RRM) containing 3. (517 aa)
C3orf49Chromosome 3 open reading frame 49. (287 aa)
LOC102438801Uncharacterized protein. (429 aa)
LOC102435333Uncharacterized protein. (169 aa)
G1Q3Z3_MYOLUUncharacterized protein. (2136 aa)
G1Q3L1_MYOLUUncharacterized protein. (419 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
G1Q215_MYOLUSF3A2 domain-containing protein. (360 aa)
G1Q0H1_MYOLUSmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (79 aa)
G1Q015_MYOLUSm domain-containing protein. (106 aa)
G1PXW2_MYOLUSm domain-containing protein. (108 aa)
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
Server load: low (18%) [HD]