47 items (Myotis lucifugus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UNC13A	Uncharacterized protein. (230 aa)
	GLS2	Glutaminase 2. (602 aa)
	G1QG80_MYOLU	Uncharacterized protein. (350 aa)
	SYN3	Synapsin III. (392 aa)
	APBA1	Amyloid beta precursor protein binding family A member 1. (834 aa)
	L7N1E7_MYOLU	Amino acid transporter. (490 aa)
	G1QF04_MYOLU	EF-hand_14 domain-containing protein. (281 aa)
	CPLX2	Complexin 2. (134 aa)
	RIMS1	Regulating synaptic membrane exocytosis 1. (1563 aa)
	ALDH5A1	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (418 aa)
	GAD1	Glutamate decarboxylase 1. (595 aa)
	LIN7B	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (200 aa)
	G1Q8F2_MYOLU	Uncharacterized protein. (382 aa)
	SLC18A3	Solute carrier family 18 member A3. (496 aa)
	SLC32A1	Solute carrier family 32 member 1. (518 aa)
	G1PZK2_MYOLU	Uncharacterized protein. (1557 aa)
	PRAF2	PRA1 family protein. (178 aa)
	SLC5A7	Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (580 aa)
	LIN7C	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (197 aa)
	SLC22A2	Solute carrier family 22 member 2. (554 aa)
	SYN1	Synapsin I. (703 aa)
	STXBP1	Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family. (602 aa)
	DNAJC5B	DnaJ heat shock protein family (Hsp40) member C5 beta. (200 aa)
	SLC1A2	Amino acid transporter. (575 aa)
	G1PF42_MYOLU	ANK_REP_REGION domain-containing protein. (541 aa)
	SYN2	Synapsin II. (591 aa)
	UNC13B	Unc-13 homolog B. (1628 aa)
	SLC38A2	Solute carrier family 38 member 2. (495 aa)
	ARL6IP5	PRA1 family protein. (188 aa)
	SLC18A2	Solute carrier family 18 member A2. (516 aa)
	RAB3A	RAB3A, member RAS oncogene family. (228 aa)
	CASK	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. (803 aa)
	SLC17A7	Solute carrier family 17 member 7. (393 aa)
	ABAT	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (506 aa)
	SLC6A11	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (585 aa)
	SLC1A6	Amino acid transporter. (564 aa)
	GAD2	Glutamate decarboxylase 2. (585 aa)
	UNC13C	Unc-13 homolog C. (2214 aa)
	SLC1A7	Amino acid transporter. (474 aa)
	SLC6A1	Solute carrier family 6 member 1. (602 aa)
	CHAT	Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family. (706 aa)
	NAAA	N-acylethanolamine acid amidase; Belongs to the acid ceramidase family. (328 aa)
	LIN7A	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (220 aa)
	MAOA	Amine oxidase. (526 aa)
	SLC6A13	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (601 aa)
	RIMS2	Regulating synaptic membrane exocytosis 2. (970 aa)
	RIMS3	Regulating synaptic membrane exocytosis 3. (308 aa)

Your Current Organism:

Myotis lucifugus

NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABAT	ALDH5A1	ENSMLUP00000008838	ENSMLUP00000021626	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.985
ABAT	GAD1	ENSMLUP00000008838	ENSMLUP00000021570	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamate decarboxylase 1.	0.962
ABAT	GAD2	ENSMLUP00000008838	ENSMLUP00000007453	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamate decarboxylase 2.	0.951
ABAT	L7N1E7_MYOLU	ENSMLUP00000008838	ENSMLUP00000007051	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Amino acid transporter.	0.518
ABAT	SLC1A2	ENSMLUP00000008838	ENSMLUP00000009180	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Amino acid transporter.	0.505
ABAT	SLC1A6	ENSMLUP00000008838	ENSMLUP00000008495	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Amino acid transporter.	0.510
ABAT	SLC1A7	ENSMLUP00000008838	ENSMLUP00000002207	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Amino acid transporter.	0.505
ABAT	SLC5A7	ENSMLUP00000008838	ENSMLUP00000015777	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	0.443
ALDH5A1	ABAT	ENSMLUP00000021626	ENSMLUP00000008838	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.985
ALDH5A1	G1PF42_MYOLU	ENSMLUP00000021626	ENSMLUP00000009167	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	ANK_REP_REGION domain-containing protein.	0.583
ALDH5A1	G1QF04_MYOLU	ENSMLUP00000021626	ENSMLUP00000022287	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	EF-hand_14 domain-containing protein.	0.583
ALDH5A1	GAD1	ENSMLUP00000021626	ENSMLUP00000021570	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Glutamate decarboxylase 1.	0.910
ALDH5A1	GAD2	ENSMLUP00000021626	ENSMLUP00000007453	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Glutamate decarboxylase 2.	0.801
ALDH5A1	GLS2	ENSMLUP00000021626	ENSMLUP00000006268	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Glutaminase 2.	0.583
ALDH5A1	MAOA	ENSMLUP00000021626	ENSMLUP00000001310	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Amine oxidase.	0.634
ALDH5A1	SLC5A7	ENSMLUP00000021626	ENSMLUP00000015777	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	0.415
APBA1	CASK	ENSMLUP00000007103	ENSMLUP00000002731	Amyloid beta precursor protein binding family A member 1.	Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.	0.998
APBA1	CPLX2	ENSMLUP00000007103	ENSMLUP00000022045	Amyloid beta precursor protein binding family A member 1.	Complexin 2.	0.467
APBA1	G1QG80_MYOLU	ENSMLUP00000007103	ENSMLUP00000022713	Amyloid beta precursor protein binding family A member 1.	Uncharacterized protein.	0.704
APBA1	LIN7A	ENSMLUP00000007103	ENSMLUP00000001397	Amyloid beta precursor protein binding family A member 1.	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.	0.894