STRINGSTRING
G1Q3Z3_MYOLU G1Q3Z3_MYOLU SNRNP40 SNRNP40 SF3B1 SF3B1 SNRPD2 SNRPD2 ZCRB1 ZCRB1 SF3B6 SF3B6 PRPF8 PRPF8 G1P1C7_MYOLU G1P1C7_MYOLU YBX2 YBX2 POLR2L POLR2L POLR2D POLR2D YBX3 YBX3 G1PB48_MYOLU G1PB48_MYOLU SF3B5 SF3B5 LOC102428798 LOC102428798 POLR2A POLR2A SNRPD1 SNRPD1 TXNL4A TXNL4A ZRSR2 ZRSR2 SNRPD3 SNRPD3 POLR2J POLR2J GTF2F2 GTF2F2 SNRNP200 SNRNP200 SF3B4 SF3B4 G1PGR0_MYOLU G1PGR0_MYOLU SRSF1 SRSF1 POLR2G POLR2G DDX23 DDX23 SF3B2 SF3B2 DDX42 DDX42 EFTUD2 EFTUD2 POLR2I POLR2I POLR2E POLR2E SNRPE SNRPE SNRPF SNRPF G1PN67_MYOLU G1PN67_MYOLU POLR2F POLR2F SF3B3 SF3B3 NCBP1 NCBP1 GTF2F1 GTF2F1 SNRNP25 SNRNP25 LOC102428014 LOC102428014 LOC102439156 LOC102439156 POLR2B POLR2B SNRPB SNRPB ZMAT5 ZMAT5 NCBP2 NCBP2 G1PYI8_MYOLU G1PYI8_MYOLU G1PZB4_MYOLU G1PZB4_MYOLU G1PZT7_MYOLU G1PZT7_MYOLU G1Q015_MYOLU G1Q015_MYOLU G1Q0H1_MYOLU G1Q0H1_MYOLU G1Q127_MYOLU G1Q127_MYOLU SNRPG SNRPG G1Q3G9_MYOLU G1Q3G9_MYOLU G1Q3T8_MYOLU G1Q3T8_MYOLU SNRNP35 SNRNP35 G1Q4T1_MYOLU G1Q4T1_MYOLU RNPC3 RNPC3 SNRPD2-2 SNRPD2-2 ENSMLUP00000019566 ENSMLUP00000019566 G1Q7F7_MYOLU G1Q7F7_MYOLU G1Q7Y0_MYOLU G1Q7Y0_MYOLU G1Q7Z0_MYOLU G1Q7Z0_MYOLU PDCD7 PDCD7 SNRPD2-3 SNRPD2-3 G1Q9D0_MYOLU G1Q9D0_MYOLU LOC102424738 LOC102424738 LOC102421678 LOC102421678 SNRPD2-4 SNRPD2-4 G1QCT7_MYOLU G1QCT7_MYOLU LOC102438952 LOC102438952 G1QD04_MYOLU G1QD04_MYOLU G1QD57_MYOLU G1QD57_MYOLU SNRPD2-5 SNRPD2-5 G1QDM7_MYOLU G1QDM7_MYOLU SRSF7 SRSF7 LOC102434604 LOC102434604 G1QF11_MYOLU G1QF11_MYOLU POLR2H POLR2H G1QFC2_MYOLU G1QFC2_MYOLU LOC102437528 LOC102437528
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
G1Q3Z3_MYOLUUncharacterized protein. (2136 aa)
SNRNP40WD_REPEATS_REGION domain-containing protein. (404 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
ZCRB1Uncharacterized protein. (217 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
PRPF8Pre-mRNA processing factor 8. (2338 aa)
G1P1C7_MYOLUS1 domain-containing protein. (172 aa)
YBX2Y-box binding protein 2. (335 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
POLR2DRNA polymerase II subunit D. (118 aa)
YBX3Y-box binding protein 3. (268 aa)
G1PB48_MYOLUCSD_1 domain-containing protein. (330 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LOC102428798Uncharacterized protein. (58 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1972 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (129 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
ZRSR2Uncharacterized protein. (485 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
POLR2JRNA polymerase II subunit J. (117 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
SNRNP200Uncharacterized protein. (2139 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
G1PGR0_MYOLUSplicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SRSF1Uncharacterized protein. (248 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
DDX23Uncharacterized protein. (818 aa)
SF3B2Splicing factor 3b subunit 2. (896 aa)
DDX42DEAD-box helicase 42. (949 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (974 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (85 aa)
G1PN67_MYOLUUncharacterized protein. (248 aa)
POLR2FUncharacterized protein. (129 aa)
SF3B3Splicing factor 3b subunit 3. (1216 aa)
NCBP1Nuclear cap binding protein subunit 1. (779 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (517 aa)
SNRNP25Small nuclear ribonucleoprotein U11/U12 subunit 25. (171 aa)
LOC102428014Uncharacterized protein. (224 aa)
LOC102439156RPOLD domain-containing protein. (275 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1175 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (235 aa)
ZMAT5Zinc finger matrin-type 5. (170 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
G1PYI8_MYOLURNA_pol_Rpb5_N domain-containing protein. (162 aa)
G1PZB4_MYOLUCSD domain-containing protein. (287 aa)
G1PZT7_MYOLUC3H1-type domain-containing protein. (433 aa)
G1Q015_MYOLUSm domain-containing protein. (106 aa)
G1Q0H1_MYOLUSmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (79 aa)
G1Q127_MYOLUUncharacterized protein. (57 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
G1Q3G9_MYOLUWD_REPEATS_REGION domain-containing protein. (358 aa)
G1Q3T8_MYOLUUncharacterized protein. (213 aa)
SNRNP35Small nuclear ribonucleoprotein U11/U12 subunit 35. (246 aa)
G1Q4T1_MYOLUUncharacterized protein. (247 aa)
RNPC3RNA binding region (RNP1, RRM) containing 3. (517 aa)
SNRPD2-2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
ENSMLUP00000019566annotation not available (275 aa)
G1Q7F7_MYOLURPOLD domain-containing protein. (194 aa)
G1Q7Y0_MYOLUNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (113 aa)
G1Q7Z0_MYOLUUncharacterized protein. (819 aa)
PDCD7Programmed cell death 7. (469 aa)
SNRPD2-3Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
G1Q9D0_MYOLUDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1173 aa)
LOC102424738Sm domain-containing protein. (106 aa)
LOC102421678Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SNRPD2-4Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (117 aa)
G1QCT7_MYOLURPOLD domain-containing protein. (274 aa)
LOC102438952CSD domain-containing protein. (285 aa)
G1QD04_MYOLUSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
G1QD57_MYOLUSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SNRPD2-5Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (121 aa)
G1QDM7_MYOLUUncharacterized protein. (126 aa)
SRSF7Uncharacterized protein. (238 aa)
LOC102434604Sm domain-containing protein. (106 aa)
G1QF11_MYOLUUncharacterized protein. (217 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
G1QFC2_MYOLUDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1173 aa)
LOC102437528annotation not available (106 aa)
Your Current Organism:
Myotis lucifugus
NCBI taxonomy Id: 59463
Other names: M. lucifugus, little brown bat
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