STRINGSTRING
Tola_2046 Tola_2046 Tola_2047 Tola_2047 Tola_2048 Tola_2048 Tola_2051 Tola_2051 fcl fcl gmd gmd Tola_2054 Tola_2054
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tola_2046KEGG: ppd:Ppro_2105 polysaccharide biosynthesis protein. (370 aa)
Tola_2047KEGG: ftn:FTN_0431 hypothetical protein. (433 aa)
Tola_2048PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3219 glycosyl transferase family protein. (242 aa)
Tola_2051PFAM: NUDIX hydrolase; KEGG: cko:CKO_00734 hypothetical protein. (155 aa)
fclNAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (321 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (371 aa)
Tola_2054PFAM: polysaccharide biosynthesis protein; KEGG: cco:CCC13826_0528 cytosol aminopeptidase. (410 aa)
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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