STRINGSTRING
Tola_2346 Tola_2346 Tola_0734 Tola_0734 Tola_0722 Tola_0722 Tola_0715 Tola_0715 Tola_0705 Tola_0705 Tola_0694 Tola_0694 Tola_0692 Tola_0692 Tola_0684 Tola_0684 selO selO nifH nifH Tola_0609 Tola_0609 Tola_0585 Tola_0585 Tola_0577 Tola_0577 Tola_0558 Tola_0558 purD purD rpmE rpmE priA priA Tola_0473 Tola_0473 menF menF Tola_0423 Tola_0423 Tola_0415 Tola_0415 speA speA Tola_0376 Tola_0376 Tola_0355 Tola_0355 Tola_0348 Tola_0348 Tola_0322 Tola_0322 rpmJ-2 rpmJ-2 Tola_0308 Tola_0308 Tola_0304 Tola_0304 Tola_0303 Tola_0303 Tola_0259 Tola_0259 Tola_0253 Tola_0253 dtd dtd edd edd Tola_0211 Tola_0211 Tola_0183 Tola_0183 rpmB rpmB rpmG rpmG Tola_0169 Tola_0169 Tola_0157 Tola_0157 Tola_0134 Tola_0134 rplQ rplQ rpsD rpsD rpsK rpsK rpsM rpsM rpmJ rpmJ rplO rplO rpmD rpmD rpsE rpsE rplR rplR rplF rplF rpsH rpsH rpsN rpsN rplE rplE rplX rplX rplN rplN rpsQ rpsQ rpmC rpmC rplP rplP rpsC rpsC rplV rplV rpsS rpsS rplB rplB rplW rplW rplD rplD rplC rplC rpsJ rpsJ argB argB argC argC Tola_0055 Tola_0055 Tola_0042 Tola_0042 recF recF dnaA dnaA rpmH rpmH Tola_3141 Tola_3141 lysA lysA Tola_3065 Tola_3065 Tola_3060 Tola_3060 Tola_3030 Tola_3030 tmcA tmcA nfo nfo Tola_2978 Tola_2978 Tola_2974 Tola_2974 Tola_2970 Tola_2970 rpsP rpsP rplS rplS rpsT rpsT Tola_2955 Tola_2955 rplM rplM rpsI rpsI Tola_2916 Tola_2916 Tola_2906 Tola_2906 Tola_2867 Tola_2867 Tola_2812 Tola_2812 nusG nusG rplK rplK rplA rplA rplJ rplJ rplL rplL rpsL rpsL rpsG rpsG Tola_2727 Tola_2727 ybeY ybeY Tola_2684 Tola_2684 Tola_2678 Tola_2678 dnaG dnaG rpsU rpsU Tola_2665 Tola_2665 Tola_2656 Tola_2656 Tola_2590 Tola_2590 Tola_2554 Tola_2554 ubiX ubiX fis fis Tola_2531 Tola_2531 rpsF rpsF rpsR rpsR rplI rplI Tola_2481 Tola_2481 Tola_2475 Tola_2475 Tola_2463 Tola_2463 Tola_2446 Tola_2446 Tola_2424 Tola_2424 rplU rplU rpmA rpmA Tola_2371 Tola_2371 Tola_2366 Tola_2366 Tola_2340 Tola_2340 rnfC-2 rnfC-2 Tola_2311 Tola_2311 ychF ychF Tola_2301 Tola_2301 Tola_2294 Tola_2294 Tola_2293 Tola_2293 Tola_2269 Tola_2269 Tola_2260 Tola_2260 nusA nusA rpsO rpsO Tola_2216 Tola_2216 recR recR hemH hemH rpmF rpmF Tola_2184 Tola_2184 Tola_2174 Tola_2174 guaB guaB argA argA Tola_2147 Tola_2147 Tola_2135 Tola_2135 rpsB rpsB Tola_2094 Tola_2094 Tola_2089 Tola_2089 Tola_2078 Tola_2078 sbcD sbcD tadA tadA Tola_1976 Tola_1976 Tola_1966 Tola_1966 Tola_1955 Tola_1955 Tola_1954 Tola_1954 Tola_1951 Tola_1951 Tola_1949 Tola_1949 Tola_1948 Tola_1948 Tola_1891 Tola_1891 Tola_1852 Tola_1852 Tola_1833 Tola_1833 edd-3 edd-3 Tola_1765 Tola_1765 Tola_1751 Tola_1751 rplY rplY rpmI rpmI rplT rplT ihfA ihfA Tola_1723 Tola_1723 Tola_1702 Tola_1702 Tola_1701 Tola_1701 Tola_1700 Tola_1700 Tola_1699 Tola_1699 Tola_1698 Tola_1698 Tola_1697 Tola_1697 Tola_1696 Tola_1696 Tola_1695 Tola_1695 Tola_1694 Tola_1694 Tola_1693 Tola_1693 Tola_1692 Tola_1692 Tola_1691 Tola_1691 Tola_1690 Tola_1690 Tola_1689 Tola_1689 Tola_1688 Tola_1688 Tola_1687 Tola_1687 Tola_1686 Tola_1686 Tola_1685 Tola_1685 Tola_1684 Tola_1684 Tola_1661 Tola_1661 Tola_1642 Tola_1642 Tola_1641 Tola_1641 Tola_1607 Tola_1607 Tola_1584 Tola_1584 truA truA Tola_1557 Tola_1557 ihfB ihfB Tola_1537 Tola_1537 Tola_1536 Tola_1536 Tola_1509 Tola_1509 Tola_1495 Tola_1495 rnfC rnfC nth nth Tola_1367 Tola_1367 Tola_1344 Tola_1344 Tola_1331 Tola_1331 Tola_1318 Tola_1318 Tola_1311 Tola_1311 Tola_1304 Tola_1304 Tola_1248 Tola_1248 Tola_1239 Tola_1239 Tola_1204 Tola_1204 Tola_1187 Tola_1187 Tola_1178 Tola_1178 Tola_1142 Tola_1142 bioB bioB Tola_1091 Tola_1091 Tola_1086 Tola_1086 Tola_1071 Tola_1071 Tola_1045 Tola_1045 Tola_1036 Tola_1036 Tola_1030 Tola_1030 Tola_1004 Tola_1004 Tola_0931 Tola_0931 Tola_0918 Tola_0918 dnaQ dnaQ rnhA rnhA Tola_0907 Tola_0907 Tola_0886 Tola_0886 Tola_0875 Tola_0875 Tola_0853 Tola_0853 recO recO Tola_0840 Tola_0840 Tola_0838 Tola_0838 Tola_0836 Tola_0836 hemA hemA ispE ispE edd-2 edd-2 Tola_0764 Tola_0764 Tola_0760 Tola_0760 Tola_0746 Tola_0746
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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Tola_2346PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sde:Sde_3214 gluconolactonase. (290 aa)
Tola_0734Transcriptional regulator, TraR/DksA family; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: pst:PSPTO_3419 C4-type zinc finger DksA/TraR family protein. (76 aa)
Tola_0722PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: mfa:Mfla_2724 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. (91 aa)
Tola_0715SMART: AAA ATPase; KEGG: son:SO_0644 prophage MuSo1, DNA transposition protein, putative. (241 aa)
Tola_0705PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: mms:mma_0801 RNA-directed DNA polymerase. (343 aa)
Tola_0694PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: she:Shewmr4_2298 glutathione-dependent formaldehyde-activating, GFA. (141 aa)
Tola_0692PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mmw:Mmwyl1_2000 glutathione-dependent formaldehyde-activating GFA. (131 aa)
Tola_0684PFAM: beta-lactamase domain protein; KEGG: spe:Spro_0372 hypothetical protein. (340 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). (519 aa)
nifHNitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. (295 aa)
Tola_0609PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: asa:ASA_3407 hypothetical protein. (164 aa)
Tola_0585TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: vco:VC0395_1020 nicotinic acid mononucleotide adenylyltransferase; Belongs to the NadD family. (176 aa)
Tola_0577PFAM: ADP-ribosylation/Crystallin J1; KEGG: hch:HCH_07000 ADP-ribosylglycohydrolase. (314 aa)
Tola_0558PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: aav:Aave_0758 pirin domain protein; Belongs to the pirin family. (240 aa)
purDKEGG: aha:AHA_0840 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; Belongs to the GARS family. (428 aa)
rpmERibosomal protein L31; Binds the 23S rRNA. (70 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (734 aa)
Tola_0473PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: aha:AHA_4111 ATP-dependent protease La. (194 aa)
menFIsochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (439 aa)
Tola_0423PFAM: Stringent starvation protein B; KEGG: aha:AHA_3899 stringent starvation protein B. (146 aa)
Tola_04155-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cko:CKO_03358 hypothetical protein. (292 aa)
speAArginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (635 aa)
Tola_0376PFAM: heat shock protein Hsp20; KEGG: afr:AFE_2086 heat shock protein, HSP20 family; Belongs to the small heat shock protein (HSP20) family. (143 aa)
Tola_0355PFAM: regulatory protein TetR; KEGG: azo:azo0243 TetR family transcriptional regulator. (202 aa)
Tola_0348PFAM: LemA family protein; KEGG: cja:CJA_0923 hypothetical protein. (198 aa)
Tola_0322PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: gbm:Gbem_0757 methyltransferase type 11. (202 aa)
rpmJ-2TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: vsa:VSAL_I0889 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (41 aa)
Tola_0308PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; Belongs to the UPF0251 family. (93 aa)
Tola_0304PFAM: Integrase catalytic region; KEGG: spc:Sputcn32_3935 putative transposase. (695 aa)
Tola_0303PFAM: TnsA endonuclease; KEGG: asa:ASA_4341 transposon Tn7 transposition protein TnsA. (276 aa)
Tola_0259PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: asa:ASA_3930 beta-ureidopropionase. (273 aa)
Tola_0253TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: asa:ASA_3937 rod shape-determining protein MreB. (347 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (146 aa)
edd6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (600 aa)
Tola_0211PFAM: Glutathione S-transferase domain; KEGG: bid:Bind_2356 glutathione S-transferase domain-containing protein; Belongs to the GST superfamily. (225 aa)
Tola_0183TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: aha:AHA_0160 DNA repair protein RadC; Belongs to the UPF0758 family. (224 aa)
rpmBTIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: cja:CJA_3515 ribosomal protein L28-related protein; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
rpmGTIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: asa:ASA_4227 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (55 aa)
Tola_0169KEGG: aha:AHA_0506 O-acetylhomoserine sulfhydrylase MetY; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase. (422 aa)
Tola_0157PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: swd:Swoo_0043 DNA topoisomerase type IA Zn finger domain-containing protein. (190 aa)
Tola_0134KEGG: azo:azo0531 hypothetical protein. (308 aa)
rplQTIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: shw:Sputw3181_0182 50S ribosomal protein L17. (128 aa)
rpsDRibosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa)
rpsKRibosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa)
rpsMRibosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa)
rpmJTIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: asa:ASA_4066 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (37 aa)
rplORibosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa)
rpmDTIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: asa:ASA_4069 ribosomal protein L30. (60 aa)
rpsERibosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (166 aa)
rplRRibosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (117 aa)
rplFRibosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa)
rpsHRibosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa)
rpsNRibosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
rplERibosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rplXRibosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (105 aa)
rplNRibosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rpsQRibosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (82 aa)
rpmCTIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: aha:AHA_0317 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (63 aa)
rplPRibosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa)
rpsCRibosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (238 aa)
rplVRibosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (115 aa)
rpsSRibosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rplBRibosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (273 aa)
rplWRibosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (101 aa)
rplDRibosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (201 aa)
rplCRibosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (212 aa)
rpsJRibosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (260 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (335 aa)
Tola_0055Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; histidine kinase HAMP region domain protein; KEGG: spe:Spro_1028 multi-sensor hybrid histidine kinase. (872 aa)
Tola_0042PFAM: beta-lactamase domain protein; KEGG: mxa:MXAN_0965 hypothetical protein. (319 aa)
recFDNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (357 aa)
dnaAChromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (461 aa)
rpmHTIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: pmr:PMI3131 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (45 aa)
Tola_3141KEGG: aha:AHA_4270 chromosome partitioning protein ParB; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family. (302 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (416 aa)
Tola_3065KEGG: ppr:PBPRB0271 putative L-ascorbate 6-phosphate lactonase. (355 aa)
Tola_3060KEGG: bpe:BP2606 hypothetical protein. (298 aa)
Tola_3030KEGG: pst:PSPTO_3548 hypothetical protein. (367 aa)
tmcAProtein of unknown function DUF699 ATPase putative; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). (691 aa)
nfoApurinic endonuclease Apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate. (279 aa)
Tola_2978KEGG: aha:AHA_4129 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: HRDC domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: helicase domain protein; HRDC domain protein; DEAD-like helicase. (604 aa)
Tola_2974PFAM: Squalene/phytoene synthase; KEGG: neu:NE1958 squalene and phytoene synthase. (343 aa)
Tola_2970PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; KEGG: cps:CPS_0338 RNA-binding protein. (185 aa)
rpsPTIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: pha:PSHAa0944 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (82 aa)
rplSRibosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (115 aa)
rpsTRibosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa)
Tola_2955TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: aha:AHA_0681 riboflavin biosynthesis protein RibF; Belongs to the ribF family. (317 aa)
rplMRibosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa)
rpsIPFAM: ribosomal protein S9; KEGG: asa:ASA_0334 30S ribosomal subunit protein S9; Belongs to the universal ribosomal protein uS9 family. (130 aa)
Tola_2916PFAM: Pirin domain protein; KEGG: cvi:CV_1920 pirin-like protein; Belongs to the pirin family. (280 aa)
Tola_2906PFAM: regulatory protein TetR; KEGG: aha:AHA_0023 TetR family transcriptional regulator. (192 aa)
Tola_2867PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: eca:ECA1418 protein-tyrosine-phosphatase. (145 aa)
Tola_2812KEGG: eba:ebA4070 T/U mismatch-specific DNA glycosylase. (167 aa)
nusGNusG antitermination factor; Participates in transcription elongation, termination and antitermination. (180 aa)
rplKRibosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa)
rplARibosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (234 aa)
rplJRibosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (167 aa)
rplLRibosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (121 aa)
rpsLRibosomal protein S12; With S4 and S5 plays an important role in translational accuracy. (124 aa)
rpsGRibosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
Tola_2727Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (464 aa)
ybeYProtein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (155 aa)
Tola_2684PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: asa:ASA_1464 transposase subunit 2. (251 aa)
Tola_2678PFAM: protein of unknown function DUF927; P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein; KEGG: eta:ETA_24220 putative prophage primase. (913 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (582 aa)
rpsUTIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: asa:ASA_3464 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (71 aa)
Tola_2665TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: aha:AHA_3848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. (162 aa)
Tola_2656TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA1848 PTS system, alpha-glucoside-specific IIBC component. (527 aa)
Tola_2590Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa)
Tola_2554TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; HI0933 family protein; NADH:flavin oxidoreductase/NADH oxidase; KEGG: kpe:KPK_2907 oxidoreductase, FAD/FMN-binding/flavocytochrome c. (926 aa)
ubiX3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (200 aa)
fisTranscriptional regulator, Fis family; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (99 aa)
Tola_2531Hypothetical protein; KEGG: asa:ASA_0961 phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific. (437 aa)
rpsFRibosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (124 aa)
rpsRRibosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (76 aa)
rplIRibosomal protein L9; Binds to the 23S rRNA. (149 aa)
Tola_2481PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: pla:Plav_3460 beta-lactamase domain-containing protein. (452 aa)
Tola_2475PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: pla:Plav_3455 poly-beta-hydroxybutyrate polymerase domain-containing protein. (583 aa)
Tola_2463Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: rso:RS05643 putative transcription regulator protein. (210 aa)
Tola_2446TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: bpt:Bpet1083 DNA repair protein RadC-like protein; Belongs to the UPF0758 family. (168 aa)
Tola_2424PFAM: helicase domain protein; SMART: DEAD-like helicase; KEGG: net:Neut_0104 helicase domain-containing protein. (761 aa)
rplURibosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa)
rpmATIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: ypb:YPTS_0495 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (85 aa)
Tola_2371PFAM: ApaG domain protein; KEGG: vvy:VV0477 ApaG. (123 aa)
Tola_2366PFAM: aminoglycoside phosphotransferase; KEGG: asa:ASA_3346 aminoglycoside phosphotransferase. (328 aa)
Tola_2340PFAM: metallophosphoesterase; KEGG: mxa:MXAN_6383 Ser/Thr protein phosphatase family protein. (391 aa)
rnfC-2Electron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (483 aa)
Tola_2311PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: aha:AHA_1867 recombination factor protein RarA. (448 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa)
Tola_2301KEGG: aha:AHA_3537 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK. (161 aa)
Tola_2294PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gme:Gmet_0239 CMP/dCMP deaminase, zinc-binding protein. (203 aa)
Tola_2293PFAM: iron-containing alcohol dehydrogenase; KEGG: glo:Glov_0177 iron-containing alcohol dehydrogenase. (383 aa)
Tola_2269KEGG: vfm:VFMJ11_0911 hypothetical protein. (382 aa)
Tola_2260DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (555 aa)
nusANusA antitermination factor; Participates in both transcription termination and antitermination. (499 aa)
rpsORibosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa)
Tola_2216Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (110 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (200 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (325 aa)
rpmFTIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: amc:MADE_02335 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (54 aa)
Tola_2184PFAM: peptidase M16 domain protein; KEGG: asa:ASA_1875 insulinase; Belongs to the peptidase M16 family. (929 aa)
Tola_2174PFAM: thioesterase superfamily protein; KEGG: asa:ASA_2794 acyl-CoA thioester hydrolase. (132 aa)
guaBInosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (487 aa)
argATIGRFAM: amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; KEGG: aha:AHA_2569 N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. (442 aa)
Tola_2147KEGG: aha:AHA_2107 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B. (791 aa)
Tola_2135TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vvy:VV1012 PTS system, N-acetylglucosamine-specific IIABC component. (500 aa)
rpsBTIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: aha:AHA_1173 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (242 aa)
Tola_2094PFAM: AMMECR1 domain protein; KEGG: shl:Shal_0948 AMMECR1 domain-containing protein. (196 aa)
Tola_2089PFAM: protein of unknown function UPF0016; KEGG: dar:Daro_2248 hypothetical protein. (197 aa)
Tola_2078Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: she:Shewmr4_0324 XRE family transcriptional regulator. (186 aa)
sbcDNuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (411 aa)
tadACMP/dCMP deaminase zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (164 aa)
Tola_1976TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: ent:Ent638_3231 PTS system, glucose-like IIB subunint. (530 aa)
Tola_1966KEGG: cak:Caul_3707 urate catabolism protein; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase. (307 aa)
Tola_1955PFAM: aminotransferase class V; KEGG: ypi:YpsIP31758_3186 aminotransferase, class V. (413 aa)
Tola_1954Amidase, hydantoinase/carbamoylase family; KEGG: spe:Spro_0937 allantoate amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein. (413 aa)
Tola_1951PFAM: AMP-dependent synthetase and ligase; KEGG: aha:AHA_3218 long-chain acyl-CoA synthetases. (479 aa)
Tola_1949PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: asa:ASA_1093 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (268 aa)
Tola_1948KEGG: aha:AHA_3221 TPR repeat-containing protein. (205 aa)
Tola_1891Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (787 aa)
Tola_1852PFAM: beta-lactamase domain protein; KEGG: eca:ECA2173 hypothetical protein. (388 aa)
Tola_1833PFAM: Transketolase domain protein; KEGG: asu:Asuc_0171 transketolase domain-containing protein. (276 aa)
edd-36-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (602 aa)
Tola_1765PFAM: Serine/threonine protein kinase-related; Protein phosphatase 2C-like; tyrosine protein kinase; Stage II sporulation E family protein; SMART: serine/threonine protein kinase; protein phosphatase 2C domain protein; tyrosine protein kinase; KEGG: ppr:PBPRA2520 hypothetical protein. (575 aa)
Tola_1751PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_0968 GCN5-related N-acetyltransferase. (137 aa)
rplYRibosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. (95 aa)
rpmITIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: spe:Spro_2146 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (65 aa)
rplTRibosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (118 aa)
ihfAIntegration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (106 aa)
Tola_1723KEGG: mca:MCA3087 hypothetical protein. (533 aa)
Tola_1702TIGRFAM: ethanolamine utilization protein, EutP; KEGG: yen:YE2746 hypothetical protein; Belongs to the EutP/PduV family. (143 aa)
Tola_1701PFAM: microcompartments protein; KEGG: yen:YE2745 putative propanediol utilization protein. (117 aa)
Tola_1700PFAM: microcompartments protein; KEGG: yen:YE2744 putative propanediol utilization protein: polyhedral bodies. (182 aa)
Tola_1699PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: yen:YE2743 putative NADH dehydrogenase. (459 aa)
Tola_1698PFAM: iron-containing alcohol dehydrogenase; KEGG: yen:YE2742 putative propanediol utilization protein: propanol dehydrogenase. (371 aa)
Tola_1697PFAM: Aldehyde Dehydrogenase; KEGG: yen:YE2741 putative propanediol utilization protein: CoA-dependent propionaldehyde dehydrogenase. (467 aa)
Tola_1696TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; protein of unknown function DUF336; KEGG: yen:YE2740 putative propanediol utilization protein: B12 related; Belongs to the Cob(I)alamin adenosyltransferase family. (347 aa)
Tola_1695PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: spc:Sputcn32_0201 ethanolamine utilization protein EutN/carboxysome structural protein CcmL. (95 aa)
Tola_1694KEGG: yen:YE2738 putative propanediol utilization protein. (166 aa)
Tola_1693Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (210 aa)
Tola_1692PFAM: microcompartments protein; KEGG: set:SEN2044 propanediol utilization protein. (168 aa)
Tola_1691PFAM: microcompartments protein; KEGG: cko:CKO_00791 hypothetical protein. (91 aa)
Tola_1690KEGG: ssn:SSON_2064 putative propanediol utilization protein: diol dehydratase reactivation. (118 aa)
Tola_1689PFAM: Diol/glycerol dehydratase reactivating factor large subunit; KEGG: yen:YE2733 putative propanediol utilization protein: diol dehydratase reactivation. (608 aa)
Tola_1688PFAM: dehydratase small subunit; KEGG: eum:ECUMN_2338 propanediol utilization diol dehydratase, small subunit. (172 aa)
Tola_1687PFAM: dehydratase medium subunit; KEGG: efe:EFER_2011 propanediol utilization: diol dehydratase, medium subunit. (219 aa)
Tola_1686PFAM: dehydratase large subunit; KEGG: sea:SeAg_B2163 propanediol utilization dehydratase, large subunit. (554 aa)
Tola_1685PFAM: microcompartments protein; KEGG: yen:YE2729 putative propanediol utilization protein. (268 aa)
Tola_1684PFAM: microcompartments protein; KEGG: stm:STM2038 polyhedral body protein. (94 aa)
Tola_1661PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; Belongs to the UPF0251 family. (93 aa)
Tola_1642KEGG: azc:AZC_2054 glutathione S-transferase. (319 aa)
Tola_1641PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: npdG; NADPH-dependent F420 reductase; K06988. (208 aa)
Tola_1607PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: maq:Maqu_4137 IstB ATP binding domain-containing protein. (251 aa)
Tola_1584KEGG: spl:Spea_2304 hypothetical protein. (367 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (261 aa)
Tola_1557Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (556 aa)
ihfBIntegration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (93 aa)
Tola_1537PFAM: Ethanolamine ammonia-lyase light chain; KEGG: spe:Spro_3435 ethanolamine ammonia-lyase; Belongs to the EutC family. (264 aa)
Tola_1536PFAM: Ethanolamine ammonia lyase large subunit; KEGG: spe:Spro_3436 ethanolamine ammonia lyase large subunit. (463 aa)
Tola_1509KEGG: eca:ECA2173 hypothetical protein. (383 aa)
Tola_1495PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eta:ETA_13680 xenobiotic reductase A. (366 aa)
rnfCElectron transport complex, RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (704 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (213 aa)
Tola_1367TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_1094 hydrolase. (198 aa)
Tola_1344PFAM: protein of unknown function DUF88; KEGG: neu:NE0665 hypothetical protein. (277 aa)
Tola_1331PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: sus:Acid_2912 carboxymuconolactone decarboxylase. (283 aa)
Tola_1318Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (783 aa)
Tola_1311PFAM: protein of unknown function DUF88; KEGG: sfr:Sfri_3658 protein of unknown function DUF88. (239 aa)
Tola_1304PFAM: GCN5-related N-acetyltransferase; KEGG: tgr:Tgr7_0919 GCN5-related N-acetyltransferase. (165 aa)
Tola_1248Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (146 aa)
Tola_1239TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; KEGG: asu:Asuc_0914 PTS system, sucrose-specific IIBC subunit. (110 aa)
Tola_1204PFAM: protein of unknown function DUF134; KEGG: ppr:PBPRB1238 putative DNA-binding protein; Belongs to the UPF0251 family. (93 aa)
Tola_1187PFAM: UvrD/REP helicase; DNA topoisomerase type IA zn finger domain protein; KEGG: ecw:EcE24377A_0290 UvrD family helicase. (1013 aa)
Tola_1178PFAM: iron-containing alcohol dehydrogenase; KEGG: ypb:YPTS_0405 lactaldehyde reductase. (383 aa)
Tola_1142TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: pmr:PMI2440 plasmid-related DNA repair protein; Belongs to the UPF0758 family. (165 aa)
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (355 aa)
Tola_1091methylated-DNA/protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (159 aa)
Tola_1086Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa)
Tola_1071SMART: helicase c2; KEGG: aha:AHA_2199 ATP-dependent helicase DinG. (672 aa)
Tola_1045PFAM: iron-containing alcohol dehydrogenase; KEGG: ypb:YPTS_0405 lactaldehyde reductase. (383 aa)
Tola_1036TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: spe:Spro_1914 glucose-specific PTS system IIBC components. (468 aa)
Tola_1030PFAM: regulatory protein TetR; KEGG: vco:VC0395_A1019 transcriptional regulator, TetR family. (199 aa)
Tola_1004TIGRFAM: redox-active disulfide protein 2; KEGG: psa:PST_0232 thiol-disulfide isomerase and thioredoxins family protein. (79 aa)
Tola_0931SMART: AAA ATPase; KEGG: aha:AHA_3504 DNA replication protein, putative. (275 aa)
Tola_0918TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: asa:ASA_1513 DnaA-like protein Hda; Belongs to the DnaA family. (234 aa)
dnaQDNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (249 aa)
rnhARibonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (154 aa)
Tola_0907PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: asa:ASA_3247 short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)
Tola_0886KEGG: aha:AHA_1757 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein. (258 aa)
Tola_0875PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: asa:ASA_0831 putative nucleoside-diphosphate sugar epimerase. (299 aa)
Tola_0853PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: aha:AHA_1270 ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (386 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (239 aa)
Tola_0840PFAM: protein of unknown function DUF339; KEGG: aha:AHA_0791 TPR repeat-containing protein. (85 aa)
Tola_0838TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: spe:Spro_1914 glucose-specific PTS system IIBC components. (480 aa)
Tola_0836TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: yen:YE1643 glucose-specific PTS system IIBC components. (483 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (420 aa)
ispE4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (285 aa)
edd-26-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (602 aa)
Tola_0764TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: asa:ASA_2799 ribosome-associated protein Y. (110 aa)
Tola_0760KEGG: ppr:PBPRB0335 hypothetical protein. (292 aa)
Tola_0746PFAM: protein of unknown function DUF1320; KEGG: tgr:Tgr7_1635 hypothetical protein. (139 aa)
Your Current Organism:
Tolumonas auensis
NCBI taxonomy Id: 595494
Other names: T. auensis DSM 9187, Tolumonas auensis DSM 9187, Tolumonas auensis TA 4, Tolumonas auensis str. DSM 9187, Tolumonas auensis strain DSM 9187
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