21 items (Capsaspora owczarzaki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_009484	Integrin beta. (2354 aa)
	CAOG_005814	Uncharacterized protein. (746 aa)
	CAOG_005881	Uncharacterized protein. (1439 aa)
	CAOG_007994	Uncharacterized protein. (2686 aa)
	CAOG_001718	Uncharacterized protein. (766 aa)
	CAOG_002006	Uncharacterized protein. (1922 aa)
	CAOG_005000	Roc domain-containing protein. (428 aa)
	CAOG_010035	GSDH domain-containing protein. (1459 aa)
	CAOG_000257	Uncharacterized protein. (452 aa)
	CAOG_001571	Glutaredoxin domain-containing protein. (183 aa)
	CAOG_001284	Uncharacterized protein. (1717 aa)
	CAOG_001397	Uncharacterized protein. (739 aa)
	CAOG_005254	EGF-like domain-containing protein. (671 aa)
	CAOG_007351	Uncharacterized protein. (880 aa)
	CAOG_001213	Uncharacterized protein. (292 aa)
	CAOG_001839	Esterase/lipase. (402 aa)
	CAOG_001926	Uncharacterized protein. (5420 aa)
	CAOG_003740	TKL protein kinase. (1956 aa)
	CAOG_004498	Glycosylphosphatidylinositol specific phospholipase D1, variant. (876 aa)
	CAOG_005734	Uncharacterized protein. (1152 aa)
	CAOG_005350	Uncharacterized protein. (2143 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_000257	CAOG_001213	A0A0D2WI93	A0A0D2X0W9	Uncharacterized protein.	Uncharacterized protein.	0.953
CAOG_000257	CAOG_001284	A0A0D2WI93	A0A0D2WK13	Uncharacterized protein.	Uncharacterized protein.	0.530
CAOG_000257	CAOG_001397	A0A0D2WI93	A0A0D2WKC0	Uncharacterized protein.	Uncharacterized protein.	0.878
CAOG_000257	CAOG_001571	A0A0D2WI93	A0A0D2WJI9	Uncharacterized protein.	Glutaredoxin domain-containing protein.	0.878
CAOG_000257	CAOG_001718	A0A0D2WI93	A0A0D2VK59	Uncharacterized protein.	Uncharacterized protein.	0.953
CAOG_000257	CAOG_001926	A0A0D2WI93	A0A0D2X1E1	Uncharacterized protein.	Uncharacterized protein.	0.981
CAOG_000257	CAOG_002006	A0A0D2WI93	A0A0D2VKZ2	Uncharacterized protein.	Uncharacterized protein.	0.530
CAOG_000257	CAOG_003740	A0A0D2WI93	A0A0D2X2N0	Uncharacterized protein.	TKL protein kinase.	0.760
CAOG_000257	CAOG_004498	A0A0D2WI93	A0A0D2X361	Uncharacterized protein.	Glycosylphosphatidylinositol specific phospholipase D1, variant.	0.530
CAOG_000257	CAOG_005000	A0A0D2WI93	A0A0D2VT11	Uncharacterized protein.	Roc domain-containing protein.	0.989
CAOG_000257	CAOG_005254	A0A0D2WI93	A0A0D2WRQ7	Uncharacterized protein.	EGF-like domain-containing protein.	0.981
CAOG_000257	CAOG_005350	A0A0D2WI93	E9CAB4	Uncharacterized protein.	Uncharacterized protein.	0.760
CAOG_000257	CAOG_005734	A0A0D2WI93	A0A0D2X414	Uncharacterized protein.	Uncharacterized protein.	0.760
CAOG_000257	CAOG_005814	A0A0D2WI93	A0A0D2UJT2	Uncharacterized protein.	Uncharacterized protein.	0.833
CAOG_000257	CAOG_005881	A0A0D2WI93	A0A0D2UJZ4	Uncharacterized protein.	Uncharacterized protein.	0.981
CAOG_000257	CAOG_007351	A0A0D2WI93	A0A0D2WXK5	Uncharacterized protein.	Uncharacterized protein.	0.855
CAOG_000257	CAOG_007994	A0A0D2WI93	A0A0D2USH6	Uncharacterized protein.	Uncharacterized protein.	0.981
CAOG_000257	CAOG_009484	A0A0D2WI93	A0A0D2U6H2	Uncharacterized protein.	Integrin beta.	0.981
CAOG_000257	CAOG_010035	A0A0D2WI93	A0A0D2VY95	Uncharacterized protein.	GSDH domain-containing protein.	0.833
CAOG_001213	CAOG_000257	A0A0D2X0W9	A0A0D2WI93	Uncharacterized protein.	Uncharacterized protein.	0.953