(5 nodes) Chondroitin sulfate/dermatan sulfate metabolism network (Capsaspora owczarzaki)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_003646	Beta-1,3-galactosyltransferase 6. (570 aa)
	CAOG_007312	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1. (458 aa)
	CAOG_006190	Uncharacterized protein. (407 aa)
	CAOG_006690	Uncharacterized protein. (705 aa)
	CAOG_008151	Beta1,4-galactosyltransferase 7. (386 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_003646	CAOG_006190	A0A0D2UCH9	A0A0D2VW73	Beta-1,3-galactosyltransferase 6.	Uncharacterized protein.	0.599
CAOG_003646	CAOG_007312	A0A0D2UCH9	A0A0D2UR10	Beta-1,3-galactosyltransferase 6.	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1.	0.653
CAOG_003646	CAOG_008151	A0A0D2UCH9	A0A0D2X5N9	Beta-1,3-galactosyltransferase 6.	Beta1,4-galactosyltransferase 7.	0.877
CAOG_006190	CAOG_003646	A0A0D2VW73	A0A0D2UCH9	Uncharacterized protein.	Beta-1,3-galactosyltransferase 6.	0.599
CAOG_006190	CAOG_006690	A0A0D2VW73	A0A0D2VXG6	Uncharacterized protein.	Uncharacterized protein.	0.523
CAOG_006690	CAOG_006190	A0A0D2VXG6	A0A0D2VW73	Uncharacterized protein.	Uncharacterized protein.	0.523
CAOG_006690	CAOG_007312	A0A0D2VXG6	A0A0D2UR10	Uncharacterized protein.	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1.	0.574
CAOG_006690	CAOG_008151	A0A0D2VXG6	A0A0D2X5N9	Uncharacterized protein.	Beta1,4-galactosyltransferase 7.	0.426
CAOG_007312	CAOG_003646	A0A0D2UR10	A0A0D2UCH9	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1.	Beta-1,3-galactosyltransferase 6.	0.653
CAOG_007312	CAOG_006690	A0A0D2UR10	A0A0D2VXG6	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1.	Uncharacterized protein.	0.574
CAOG_008151	CAOG_003646	A0A0D2X5N9	A0A0D2UCH9	Beta1,4-galactosyltransferase 7.	Beta-1,3-galactosyltransferase 6.	0.877
CAOG_008151	CAOG_006690	A0A0D2X5N9	A0A0D2VXG6	Beta1,4-galactosyltransferase 7.	Uncharacterized protein.	0.426