10 items (Capsaspora owczarzaki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_000351	Uncharacterized protein. (919 aa)
	CAOG_002719	Amoeboid myosin I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1166 aa)
	CAOG_008729	TPR_REGION domain-containing protein. (1044 aa)
	CAOG_008784	Uncharacterized protein. (929 aa)
	CAOG_004278	Uncharacterized protein. (502 aa)
	CAOG_004501	Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1477 aa)
	CAOG_000211	Uncharacterized protein. (405 aa)
	CAOG_004916	Uncharacterized protein. (728 aa)
	CAOG_003343	Uncharacterized protein. (727 aa)
	CAOG_007358	Myosin IE, variant; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (873 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_000211	CAOG_000351	A0A0D2WI57	A0A0D2U0J5	Uncharacterized protein.	Uncharacterized protein.	0.653
CAOG_000211	CAOG_004278	A0A0D2WI57	A0A0D2VRJ0	Uncharacterized protein.	Uncharacterized protein.	0.443
CAOG_000351	CAOG_000211	A0A0D2U0J5	A0A0D2WI57	Uncharacterized protein.	Uncharacterized protein.	0.653
CAOG_000351	CAOG_003343	A0A0D2U0J5	A0A0D2X2D3	Uncharacterized protein.	Uncharacterized protein.	0.544
CAOG_000351	CAOG_004278	A0A0D2U0J5	A0A0D2VRJ0	Uncharacterized protein.	Uncharacterized protein.	0.772
CAOG_000351	CAOG_004916	A0A0D2U0J5	A0A0D2WS78	Uncharacterized protein.	Uncharacterized protein.	0.628
CAOG_000351	CAOG_008784	A0A0D2U0J5	A0A0D2UF69	Uncharacterized protein.	Uncharacterized protein.	0.668
CAOG_002719	CAOG_004278	A0A0D2U996	A0A0D2VRJ0	Amoeboid myosin I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.666
CAOG_002719	CAOG_004916	A0A0D2U996	A0A0D2WS78	Amoeboid myosin I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.410
CAOG_002719	CAOG_008729	A0A0D2U996	A0A0D2UCG5	Amoeboid myosin I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	TPR_REGION domain-containing protein.	0.619
CAOG_002719	CAOG_008784	A0A0D2U996	A0A0D2UF69	Amoeboid myosin I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.459
CAOG_003343	CAOG_000351	A0A0D2X2D3	A0A0D2U0J5	Uncharacterized protein.	Uncharacterized protein.	0.544
CAOG_004278	CAOG_000211	A0A0D2VRJ0	A0A0D2WI57	Uncharacterized protein.	Uncharacterized protein.	0.443
CAOG_004278	CAOG_000351	A0A0D2VRJ0	A0A0D2U0J5	Uncharacterized protein.	Uncharacterized protein.	0.772
CAOG_004278	CAOG_002719	A0A0D2VRJ0	A0A0D2U996	Uncharacterized protein.	Amoeboid myosin I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.666
CAOG_004278	CAOG_004501	A0A0D2VRJ0	A0A0D2VRZ5	Uncharacterized protein.	Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.666
CAOG_004278	CAOG_007358	A0A0D2VRJ0	A0A0D2X5B4	Uncharacterized protein.	Myosin IE, variant; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.666
CAOG_004501	CAOG_004278	A0A0D2VRZ5	A0A0D2VRJ0	Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.666
CAOG_004501	CAOG_004916	A0A0D2VRZ5	A0A0D2WS78	Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.410
CAOG_004501	CAOG_008729	A0A0D2VRZ5	A0A0D2UCG5	Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	TPR_REGION domain-containing protein.	0.619