(12 nodes) Mixed, incl. UBX domain, and PUB domain network (Capsaspora owczarzaki)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_004486	UBX domain-containing protein 2B. (303 aa)
	CAOG_008808	UBX domain-containing protein. (829 aa)
	CAOG_006313	Valosin-containing protein; Belongs to the AAA ATPase family. (813 aa)
	CAOG_000717	UBX domain-containing protein 6. (533 aa)
	CAOG_001212	UBX domain-containing protein. (631 aa)
	CAOG_002951	Uncharacterized protein. (1054 aa)
	CAOG_007528	Ubiquitin fusion degradaton protein. (369 aa)
	CAOG_007253	U-box domain-containing protein. (1081 aa)
	CAOG_002738	Ubiquitin family protein. (519 aa)
	CAOG_002815	Uncharacterized protein. (711 aa)
	CAOG_003071	UBX domain-containing protein. (363 aa)
	CAOG_005951	Nuclear protein localization protein. (607 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_000717	CAOG_001212	A0A0D2VH07	A0A0D2VIH6	UBX domain-containing protein 6.	UBX domain-containing protein.	0.993
CAOG_000717	CAOG_002815	A0A0D2VH07	A0A0D2WLZ1	UBX domain-containing protein 6.	Uncharacterized protein.	0.948
CAOG_000717	CAOG_002951	A0A0D2VH07	A0A0D2VNI8	UBX domain-containing protein 6.	Uncharacterized protein.	0.815
CAOG_000717	CAOG_003071	A0A0D2VH07	A0A0D2WNN6	UBX domain-containing protein 6.	UBX domain-containing protein.	0.910
CAOG_000717	CAOG_004486	A0A0D2VH07	A0A0D2UF59	UBX domain-containing protein 6.	UBX domain-containing protein 2B.	0.979
CAOG_000717	CAOG_005951	A0A0D2VH07	A0A0D2WUC6	UBX domain-containing protein 6.	Nuclear protein localization protein.	0.726
CAOG_000717	CAOG_006313	A0A0D2VH07	A0A0D2ULD9	UBX domain-containing protein 6.	Valosin-containing protein; Belongs to the AAA ATPase family.	0.815
CAOG_000717	CAOG_007528	A0A0D2VH07	A0A0D2VZ41	UBX domain-containing protein 6.	Ubiquitin fusion degradaton protein.	0.493
CAOG_000717	CAOG_008808	A0A0D2VH07	A0A0D2UFU1	UBX domain-containing protein 6.	UBX domain-containing protein.	0.971
CAOG_001212	CAOG_000717	A0A0D2VIH6	A0A0D2VH07	UBX domain-containing protein.	UBX domain-containing protein 6.	0.993
CAOG_001212	CAOG_002738	A0A0D2VIH6	A0A0D2WLV5	UBX domain-containing protein.	Ubiquitin family protein.	0.986
CAOG_001212	CAOG_002815	A0A0D2VIH6	A0A0D2WLZ1	UBX domain-containing protein.	Uncharacterized protein.	0.993
CAOG_001212	CAOG_002951	A0A0D2VIH6	A0A0D2VNI8	UBX domain-containing protein.	Uncharacterized protein.	0.999
CAOG_001212	CAOG_003071	A0A0D2VIH6	A0A0D2WNN6	UBX domain-containing protein.	UBX domain-containing protein.	0.994
CAOG_001212	CAOG_004486	A0A0D2VIH6	A0A0D2UF59	UBX domain-containing protein.	UBX domain-containing protein 2B.	0.994
CAOG_001212	CAOG_005951	A0A0D2VIH6	A0A0D2WUC6	UBX domain-containing protein.	Nuclear protein localization protein.	0.999
CAOG_001212	CAOG_006313	A0A0D2VIH6	A0A0D2ULD9	UBX domain-containing protein.	Valosin-containing protein; Belongs to the AAA ATPase family.	0.999
CAOG_001212	CAOG_007253	A0A0D2VIH6	A0A0D2VZS9	UBX domain-containing protein.	U-box domain-containing protein.	0.586
CAOG_001212	CAOG_007528	A0A0D2VIH6	A0A0D2VZ41	UBX domain-containing protein.	Ubiquitin fusion degradaton protein.	0.999
CAOG_001212	CAOG_008808	A0A0D2VIH6	A0A0D2UFU1	UBX domain-containing protein.	UBX domain-containing protein.	0.993