102 items (Capsaspora owczarzaki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_006244	RasGEF family protein. (674 aa)
	CAOG_003749	DH domain-containing protein. (1079 aa)
	CAOG_002349	Cytohesin-4. (1173 aa)
	CAOG_008024	Uncharacterized protein. (1388 aa)
	CAOG_007217	Uncharacterized protein. (1602 aa)
	CAOG_006717	Ras guanine nucleotide exchange factor. (956 aa)
	CAOG_006710	Rap guanine nucleotide exchange factor 4. (885 aa)
	CAOG_006323	Uncharacterized protein. (1274 aa)
	CAOG_006302	Eukaryotic translation elongation factor 1 beta 2; Belongs to the EF-1-beta/EF-1-delta family. (235 aa)
	CAOG_005306	Uncharacterized protein. (1797 aa)
	CAOG_004479	Rcc1 protein. (481 aa)
	CAOG_003988	Uncharacterized protein. (1299 aa)
	CAOG_003391	UDENN domain-containing protein. (361 aa)
	CAOG_003343	Uncharacterized protein. (727 aa)
	CAOG_002223	UDENN domain-containing protein. (921 aa)
	CAOG_001944	Uncharacterized protein. (1235 aa)
	CAOG_001550	Uncharacterized protein. (981 aa)
	CAOG_001506	Uncharacterized protein. (576 aa)
	CAOG_001245	Rho guanine nucleotide exchange factor 4. (528 aa)
	CAOG_000820	Uncharacterized protein. (1150 aa)
	CAOG_000780	SEC7 domain-containing protein. (2048 aa)
	CAOG_000561	Uncharacterized protein. (2579 aa)
	CAOG_000452	Rap guanine nucleotide exchange factor GEF2. (1126 aa)
	CAOG_007661	Uncharacterized protein. (555 aa)
	CAOG_007170	VPS9 domain-containing protein. (630 aa)
	CAOG_006939	Uncharacterized protein. (1493 aa)
	CAOG_006854	Uncharacterized protein. (581 aa)
	CAOG_006832	Cytohesin 1. (404 aa)
	CAOG_007196	Uncharacterized protein. (482 aa)
	CAOG_006925	Uncharacterized protein. (1026 aa)
	CAOG_006919	Uncharacterized protein. (1065 aa)
	CAOG_006914	Uncharacterized protein. (2018 aa)
	CAOG_006145	Uncharacterized protein. (1623 aa)
	CAOG_006464	Dock7 protein; Belongs to the DOCK family. (2013 aa)
	CAOG_005684	DHR-1 domain-containing protein; Belongs to the DOCK family. (865 aa)
	CAOG_006385	Uncharacterized protein. (560 aa)
	CAOG_005959	Uncharacterized protein. (1378 aa)
	CAOG_008823	Uncharacterized protein. (1719 aa)
	CAOG_004520	DH domain-containing protein. (813 aa)
	CAOG_005003	DH domain-containing protein. (1349 aa)
	CAOG_004207	VPS9 domain-containing protein. (699 aa)
	CAOG_004067	Uncharacterized protein. (1287 aa)
	CAOG_009712	Uncharacterized protein. (607 aa)
	CAOG_004136	Uncharacterized protein. (626 aa)
	CAOG_003928	Uncharacterized protein. (494 aa)
	CAOG_009723	Uncharacterized protein. (1609 aa)
	CAOG_003280	PH domain-containing protein. (431 aa)
	CAOG_003110	Uncharacterized protein. (1213 aa)
	CAOG_003491	Uncharacterized protein. (1087 aa)
	CAOG_002832	Roadblock domain containing 3. (137 aa)
	CAOG_003402	Uncharacterized protein. (685 aa)
	CAOG_003360	Uncharacterized protein. (2047 aa)
	CAOG_003326	Uncharacterized protein. (637 aa)
	CAOG_002450	UDENN domain-containing protein. (1089 aa)
	CAOG_002394	Uncharacterized protein. (2240 aa)
	CAOG_002962	WD_REPEATS_REGION domain-containing protein. (392 aa)
	CAOG_008647	PH domain-containing protein. (440 aa)
	CAOG_008593	Uncharacterized protein. (883 aa)
	CAOG_002128	Uncharacterized protein. (1516 aa)
	CAOG_001708	Uncharacterized protein. (1033 aa)
	CAOG_002245	Uncharacterized protein. (2047 aa)
	CAOG_001835	Uncharacterized protein. (213 aa)
	CAOG_001704	Uncharacterized protein. (1436 aa)
	CAOG_001016	Uncharacterized protein. (2245 aa)
	CAOG_001561	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (141 aa)
	CAOG_000778	Ras-specific guanine nucleotide-releasing factor RalGPS1. (1052 aa)
	CAOG_001399	UDENN FLCN/SMCR8-type domain-containing protein. (1392 aa)
	CAOG_000737	Uncharacterized protein. (908 aa)
	CAOG_000399	Uncharacterized protein; Belongs to the DOCK family. (1851 aa)
	CAOG_001013	Uncharacterized protein. (1625 aa)
	CAOG_000217	Uncharacterized protein. (339 aa)
	CAOG_008252	Uncharacterized protein. (1207 aa)
	CAOG_007236	Uncharacterized protein. (2517 aa)
	CAOG_006068	RIC1 domain-containing protein. (1295 aa)
	CAOG_004931	Translation elongation factor eEF-1 beta chain; Belongs to the EF-1-beta/EF-1-delta family. (225 aa)
	CAOG_004008	Uncharacterized protein. (1352 aa)
	CAOG_003814	Uncharacterized protein. (1951 aa)
	CAOG_003201	VPS9 domain-containing protein. (1338 aa)
	CAOG_002770	Uncharacterized protein. (1667 aa)
	CAOG_002474	Uncharacterized protein. (760 aa)
	CAOG_001732	Rap guanine nucleotide exchange factor 4. (1549 aa)
	CAOG_009414	Uncharacterized protein. (963 aa)
	CAOG_008486	UDENN domain-containing protein. (1860 aa)
	CAOG_000564	Uncharacterized protein. (1614 aa)
	CAOG_000493	Translation initiation factor eIF-2B subunit epsilon. (726 aa)
	CAOG_008185	DH domain-containing protein. (796 aa)
	CAOG_010083	DH domain-containing protein. (1178 aa)
	CAOG_005999	Uncharacterized protein. (169 aa)
	CAOG_005349	Uncharacterized protein. (1004 aa)
	CAOG_004920	VPS9 domain-containing protein. (554 aa)
	CAOG_004766	Guanine nucleotide-exchange protein. (1858 aa)
	CAOG_003123	Uncharacterized protein. (646 aa)
	CAOG_008664	UDENN domain-containing protein. (933 aa)
	CAOG_002871	Uncharacterized protein. (898 aa)
	CAOG_002852	Muscle ankyrin repeat protein 3. (1783 aa)
	CAOG_002664	Guanine nucleotide exchange factor. (1210 aa)
	CAOG_002158	Uncharacterized protein. (930 aa)
	CAOG_002109	Uncharacterized protein. (130 aa)
	CAOG_009431	Uncharacterized protein. (924 aa)
	CAOG_000585	Uncharacterized protein. (555 aa)
	CAOG_000406	Uncharacterized protein. (1596 aa)
	CAOG_000292	Uncharacterized protein. (1582 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_000292	CAOG_001013	A0A0D2U0E5	A0A0D2WIC4	Uncharacterized protein.	Uncharacterized protein.	0.527
CAOG_000292	CAOG_001016	A0A0D2U0E5	A0A0D2WJM5	Uncharacterized protein.	Uncharacterized protein.	0.406
CAOG_000292	CAOG_001245	A0A0D2U0E5	A0A0D2X0X6	Uncharacterized protein.	Rho guanine nucleotide exchange factor 4.	0.475
CAOG_000292	CAOG_003110	A0A0D2U0E5	A0A0D2WNR7	Uncharacterized protein.	Uncharacterized protein.	0.620
CAOG_000292	CAOG_004067	A0A0D2U0E5	A0A0D2WQL1	Uncharacterized protein.	Uncharacterized protein.	0.409
CAOG_000292	CAOG_005003	A0A0D2U0E5	A0A0D2WR57	Uncharacterized protein.	DH domain-containing protein.	0.425
CAOG_000292	CAOG_005349	A0A0D2U0E5	A0A0D2UI20	Uncharacterized protein.	Uncharacterized protein.	0.620
CAOG_000292	CAOG_006914	A0A0D2U0E5	A0A0D2WV52	Uncharacterized protein.	Uncharacterized protein.	0.475
CAOG_000292	CAOG_008024	A0A0D2U0E5	A0A0D2X5K3	Uncharacterized protein.	Uncharacterized protein.	0.620
CAOG_000292	CAOG_009723	A0A0D2U0E5	A0A0D2WP15	Uncharacterized protein.	Uncharacterized protein.	0.406
CAOG_000399	CAOG_001013	A0A0D2WIG2	A0A0D2WIC4	Uncharacterized protein; Belongs to the DOCK family.	Uncharacterized protein.	0.432
CAOG_000399	CAOG_005684	A0A0D2WIG2	A0A0D2WTX7	Uncharacterized protein; Belongs to the DOCK family.	DHR-1 domain-containing protein; Belongs to the DOCK family.	0.638
CAOG_000399	CAOG_006464	A0A0D2WIG2	A0A0D2WU43	Uncharacterized protein; Belongs to the DOCK family.	Dock7 protein; Belongs to the DOCK family.	0.423
CAOG_000493	CAOG_005999	A0A0D2VGC7	A0A0D2UKD7	Translation initiation factor eIF-2B subunit epsilon.	Uncharacterized protein.	0.489
CAOG_000561	CAOG_006854	A0A0D2X0G1	A0A0D2WVZ7	Uncharacterized protein.	Uncharacterized protein.	0.614
CAOG_000585	CAOG_008823	A0A0D2U1E4	A0A0D2WS05	Uncharacterized protein.	Uncharacterized protein.	0.410
CAOG_000737	CAOG_001732	A0A0D2WJ35	A0A0D2VK72	Uncharacterized protein.	Rap guanine nucleotide exchange factor 4.	0.555
CAOG_000737	CAOG_006710	A0A0D2WJ35	A0A0D2X4N6	Uncharacterized protein.	Rap guanine nucleotide exchange factor 4.	0.555
CAOG_000737	CAOG_009431	A0A0D2WJ35	A0A0D2U4U0	Uncharacterized protein.	Uncharacterized protein.	0.555
CAOG_000737	CAOG_009712	A0A0D2WJ35	A0A0D2WQ03	Uncharacterized protein.	Uncharacterized protein.	0.555