(8 nodes) Proton-transporting ATP synthase complex, catalytic core F(1) network (Capsaspora owczarzaki)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_004114	ATP synthase subunit gamma. (306 aa)
	CAOG_008614	Aamy domain-containing protein. (736 aa)
	CAOG_001889	Uncharacterized protein. (66 aa)
	CAOG_004801	ATP synthase subunit delta. (163 aa)
	CAOG_008023	H+ transporting ATP synthase O subunit isoform 2. (196 aa)
	CAOG_009030	Uncharacterized protein; Belongs to the ATPase alpha/beta chains family. (504 aa)
	CAOG_001828	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (544 aa)
	CAOG_003736	Acyl-CoA dehydrogenase. (631 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_001828	CAOG_001889	A0A0D2X1B5	A0A0D2WK81	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.998
CAOG_001828	CAOG_004114	A0A0D2X1B5	A0A0D2WQN6	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
CAOG_001828	CAOG_004801	A0A0D2X1B5	A0A0D2VSN5	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit delta.	0.999
CAOG_001828	CAOG_008023	A0A0D2X1B5	A0A0D2WYF7	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	H+ transporting ATP synthase O subunit isoform 2.	0.999
CAOG_001828	CAOG_008614	A0A0D2X1B5	A0A0D2WLE6	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Aamy domain-containing protein.	0.930
CAOG_001828	CAOG_009030	A0A0D2X1B5	A0A0D2WV98	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein; Belongs to the ATPase alpha/beta chains family.	0.999
CAOG_001889	CAOG_001828	A0A0D2WK81	A0A0D2X1B5	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
CAOG_001889	CAOG_004114	A0A0D2WK81	A0A0D2WQN6	Uncharacterized protein.	ATP synthase subunit gamma.	0.998
CAOG_001889	CAOG_004801	A0A0D2WK81	A0A0D2VSN5	Uncharacterized protein.	ATP synthase subunit delta.	0.999
CAOG_001889	CAOG_008023	A0A0D2WK81	A0A0D2WYF7	Uncharacterized protein.	H+ transporting ATP synthase O subunit isoform 2.	0.998
CAOG_001889	CAOG_009030	A0A0D2WK81	A0A0D2WV98	Uncharacterized protein.	Uncharacterized protein; Belongs to the ATPase alpha/beta chains family.	0.999
CAOG_004114	CAOG_001828	A0A0D2WQN6	A0A0D2X1B5	ATP synthase subunit gamma.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
CAOG_004114	CAOG_001889	A0A0D2WQN6	A0A0D2WK81	ATP synthase subunit gamma.	Uncharacterized protein.	0.998
CAOG_004114	CAOG_004801	A0A0D2WQN6	A0A0D2VSN5	ATP synthase subunit gamma.	ATP synthase subunit delta.	0.999
CAOG_004114	CAOG_008023	A0A0D2WQN6	A0A0D2WYF7	ATP synthase subunit gamma.	H+ transporting ATP synthase O subunit isoform 2.	0.999
CAOG_004114	CAOG_009030	A0A0D2WQN6	A0A0D2WV98	ATP synthase subunit gamma.	Uncharacterized protein; Belongs to the ATPase alpha/beta chains family.	0.999
CAOG_004801	CAOG_001828	A0A0D2VSN5	A0A0D2X1B5	ATP synthase subunit delta.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
CAOG_004801	CAOG_001889	A0A0D2VSN5	A0A0D2WK81	ATP synthase subunit delta.	Uncharacterized protein.	0.999
CAOG_004801	CAOG_004114	A0A0D2VSN5	A0A0D2WQN6	ATP synthase subunit delta.	ATP synthase subunit gamma.	0.999
CAOG_004801	CAOG_008023	A0A0D2VSN5	A0A0D2WYF7	ATP synthase subunit delta.	H+ transporting ATP synthase O subunit isoform 2.	0.999