STRINGSTRING
CAOG_006095 CAOG_006095 CAOG_007648 CAOG_007648 CAOG_008052 CAOG_008052 CAOG_004688 CAOG_004688 CAOG_004904 CAOG_004904 CAOG_004813 CAOG_004813 CAOG_004211 CAOG_004211 CAOG_004021 CAOG_004021 CAOG_004618 CAOG_004618 CAOG_004566 CAOG_004566 CAOG_001426 CAOG_001426 CAOG_000768 CAOG_000768 CAOG_005320 CAOG_005320 CAOG_001818 CAOG_001818 CAOG_001078 CAOG_001078 CAOG_002448 CAOG_002448 CAOG_000754 CAOG_000754
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAOG_006095Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (576 aa)
CAOG_007648Brush border myosin I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1016 aa)
CAOG_008052Ercc6 protein. (1576 aa)
CAOG_004688RRN7-type domain-containing protein. (553 aa)
CAOG_004904Helicase. (1078 aa)
CAOG_004813Uncharacterized protein. (350 aa)
CAOG_004211Splicing factor 3b. (1347 aa)
CAOG_004021Myosin-Ib; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1140 aa)
CAOG_004618Myosin IA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1042 aa)
CAOG_004566Uncharacterized protein. (1644 aa)
CAOG_001426Uncharacterized protein. (563 aa)
CAOG_000768Histone H2A; Belongs to the histone H2A family. (138 aa)
CAOG_005320Uncharacterized protein. (1387 aa)
CAOG_001818Histone H2B; Belongs to the histone H2B family. (127 aa)
CAOG_001078Myosin IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1589 aa)
CAOG_002448Histone acetyltransferase. (881 aa)
CAOG_000754Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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