26 items (Capsaspora owczarzaki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_005550	Uncharacterized protein. (719 aa)
	CAOG_000587	Protein transporter SEC13; Belongs to the WD repeat SEC13 family. (322 aa)
	CAOG_001151	Uncharacterized protein. (874 aa)
	CAOG_000617	Peptidase S59 domain-containing protein. (1949 aa)
	CAOG_007598	Uncharacterized protein. (1351 aa)
	CAOG_006030	Uncharacterized protein. (1475 aa)
	CAOG_004158	Nucleoporin Seh1; Belongs to the WD repeat SEC13 family. (321 aa)
	CAOG_003945	WD_REPEATS_REGION domain-containing protein. (362 aa)
	CAOG_003038	RRM Nup35-type domain-containing protein. (304 aa)
	CAOG_006913	Uncharacterized protein. (1403 aa)
	CAOG_001818	Histone H2B; Belongs to the histone H2B family. (127 aa)
	CAOG_000843	Importin N-terminal domain-containing protein. (847 aa)
	CAOG_000632	Uncharacterized protein. (339 aa)
	CAOG_000529	Uncharacterized protein. (2831 aa)
	CAOG_006026	Uncharacterized protein. (1954 aa)
	CAOG_008755	TPR_MLP1_2 domain-containing protein. (2160 aa)
	CAOG_000754	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	CAOG_000849	Uncharacterized protein. (934 aa)
	CAOG_000221	BIG2 domain-containing protein. (2281 aa)
	CAOG_003895	Nuclear pore protein. (852 aa)
	CAOG_003709	WD_REPEATS_REGION domain-containing protein. (739 aa)
	CAOG_000672	Nucleoporin. (1867 aa)
	CAOG_000543	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (732 aa)
	CAOG_008329	Nucleoporin_C domain-containing protein. (433 aa)
	CAOG_007443	Nucleoporin_C domain-containing protein. (682 aa)
	CAOG_006623	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (323 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_000221	CAOG_000529	A0A0D2U077	A0A0D2VGG3	BIG2 domain-containing protein.	Uncharacterized protein.	0.934
CAOG_000221	CAOG_000543	A0A0D2U077	A0A0D2X0F7	BIG2 domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.972
CAOG_000221	CAOG_000587	A0A0D2U077	A0A0D2WIS8	BIG2 domain-containing protein.	Protein transporter SEC13; Belongs to the WD repeat SEC13 family.	0.859
CAOG_000221	CAOG_000617	A0A0D2U077	A0A0D2WHH5	BIG2 domain-containing protein.	Peptidase S59 domain-containing protein.	0.863
CAOG_000221	CAOG_000632	A0A0D2U077	A0A0D2VGS9	BIG2 domain-containing protein.	Uncharacterized protein.	0.967
CAOG_000221	CAOG_000672	A0A0D2U077	A0A0D2X0I9	BIG2 domain-containing protein.	Nucleoporin.	0.918
CAOG_000221	CAOG_000843	A0A0D2U077	A0A0D2VHB9	BIG2 domain-containing protein.	Importin N-terminal domain-containing protein.	0.542
CAOG_000221	CAOG_000849	A0A0D2U077	A0A0D2U2B9	BIG2 domain-containing protein.	Uncharacterized protein.	0.929
CAOG_000221	CAOG_001151	A0A0D2U077	A0A0D2WIN0	BIG2 domain-containing protein.	Uncharacterized protein.	0.891
CAOG_000221	CAOG_003038	A0A0D2U077	A0A0D2VNR2	BIG2 domain-containing protein.	RRM Nup35-type domain-containing protein.	0.975
CAOG_000221	CAOG_003709	A0A0D2U077	A0A0D2X2M3	BIG2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.900
CAOG_000221	CAOG_003895	A0A0D2U077	A0A0D2X2R8	BIG2 domain-containing protein.	Nuclear pore protein.	0.973
CAOG_000221	CAOG_003945	A0A0D2U077	A0A0D2VQV0	BIG2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.908
CAOG_000221	CAOG_004158	A0A0D2U077	A0A0D2VR85	BIG2 domain-containing protein.	Nucleoporin Seh1; Belongs to the WD repeat SEC13 family.	0.974
CAOG_000221	CAOG_005550	A0A0D2U077	A0A0D2WSE5	BIG2 domain-containing protein.	Uncharacterized protein.	0.968
CAOG_000221	CAOG_006026	A0A0D2U077	A0A0D2UKH9	BIG2 domain-containing protein.	Uncharacterized protein.	0.971
CAOG_000221	CAOG_006030	A0A0D2U077	A0A0D2VVT4	BIG2 domain-containing protein.	Uncharacterized protein.	0.863
CAOG_000221	CAOG_006623	A0A0D2U077	A0A0D2WUE3	BIG2 domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.565
CAOG_000221	CAOG_006913	A0A0D2U077	A0A0D2X4T4	BIG2 domain-containing protein.	Uncharacterized protein.	0.922
CAOG_000221	CAOG_007443	A0A0D2U077	A0A0D2WX25	BIG2 domain-containing protein.	Nucleoporin_C domain-containing protein.	0.856