STRINGSTRING
CAOG_000504 CAOG_000504 CAOG_000482 CAOG_000482 CAOG_007533 CAOG_007533 CAOG_006702 CAOG_006702 CAOG_006656 CAOG_006656 CAOG_000814 CAOG_000814 CAOG_007782 CAOG_007782 CAOG_009908 CAOG_009908 CAOG_005426 CAOG_005426 CAOG_004761 CAOG_004761 CAOG_002029 CAOG_002029 CAOG_001309 CAOG_001309 CAOG_004903 CAOG_004903 CAOG_009000 CAOG_009000 CAOG_008174 CAOG_008174 CAOG_000394 CAOG_000394 CAOG_003239 CAOG_003239 CAOG_001191 CAOG_001191 CAOG_009446 CAOG_009446 CAOG_002591 CAOG_002591 CAOG_004925 CAOG_004925 CAOG_002548 CAOG_002548 CAOG_001818 CAOG_001818 CAOG_001481 CAOG_001481 CAOG_008505 CAOG_008505 CAOG_001272 CAOG_001272 CAOG_007910 CAOG_007910 CAOG_006332 CAOG_006332 CAOG_002392 CAOG_002392 CAOG_000754 CAOG_000754 CAOG_002609 CAOG_002609 CAOG_003182 CAOG_003182 CAOG_001312 CAOG_001312 CAOG_001147 CAOG_001147
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAOG_000504Uncharacterized protein. (55 aa)
CAOG_000482Heterotrimeric G protein beta subunit 1. (343 aa)
CAOG_007533Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (105 aa)
CAOG_006702Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (556 aa)
CAOG_006656Tbpl2 protein. (208 aa)
CAOG_000814Peptidylprolyl isomerase. (519 aa)
CAOG_007782Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (708 aa)
CAOG_009908Non-specific serine/threonine protein kinase. (624 aa)
CAOG_005426AGC/PDK1 protein kinase. (602 aa)
CAOG_004761Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (473 aa)
CAOG_002029Uncharacterized protein. (332 aa)
CAOG_001309DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1777 aa)
CAOG_004903E1A binding protein p300, variant. (2072 aa)
CAOG_009000Uncharacterized protein. (339 aa)
CAOG_008174DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1729 aa)
CAOG_000394Arginine methyltransferase 4-PA; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (678 aa)
CAOG_003239RNA polymerase II subunit. (121 aa)
CAOG_001191RPOL4c domain-containing protein. (143 aa)
CAOG_009446Uncharacterized protein. (1459 aa)
CAOG_002591Serine/threonine-protein phosphatase. (490 aa)
CAOG_004925RNA polymerase II core subunit. (139 aa)
CAOG_002548Strn-prov protein. (652 aa)
CAOG_001818Histone H2B; Belongs to the histone H2B family. (127 aa)
CAOG_001481RNA polymerase II core subunit. (176 aa)
CAOG_008505Peptidylprolyl isomerase. (169 aa)
CAOG_001272DNA-directed RNA polymerase I. (70 aa)
CAOG_007910DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (110 aa)
CAOG_006332DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa)
CAOG_002392Guanine nucleotide-binding protein beta subunit. (341 aa)
CAOG_000754Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CAOG_002609Xpo1 protein. (1406 aa)
CAOG_003182DNA-directed RNA polymerase 2. (211 aa)
CAOG_001312Polymerase II polypeptide C. (270 aa)
CAOG_001147CS domain-containing protein. (197 aa)
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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