(5 nodes) Tim17/Tim22/Tim23/Pmp24 family network (Capsaspora owczarzaki)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_008443	Uncharacterized protein. (202 aa)
	CAOG_002567	Peroxisomal membrane protein 4. (242 aa)
	CAOG_003685	TMEM135_C_rich domain-containing protein. (427 aa)
	CAOG_004847	Uncharacterized protein. (165 aa)
	CAOG_005909	Import inner membrane translocase subunit Tim22. (190 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_002567	CAOG_003685	A0A0D2VMM6	A0A0D2WNN1	Peroxisomal membrane protein 4.	TMEM135_C_rich domain-containing protein.	0.442
CAOG_003685	CAOG_002567	A0A0D2WNN1	A0A0D2VMM6	TMEM135_C_rich domain-containing protein.	Peroxisomal membrane protein 4.	0.442
CAOG_003685	CAOG_004847	A0A0D2WNN1	A0A0D2WS33	TMEM135_C_rich domain-containing protein.	Uncharacterized protein.	0.410
CAOG_004847	CAOG_003685	A0A0D2WS33	A0A0D2WNN1	Uncharacterized protein.	TMEM135_C_rich domain-containing protein.	0.410
CAOG_004847	CAOG_005909	A0A0D2WS33	A0A0D2WSZ8	Uncharacterized protein.	Import inner membrane translocase subunit Tim22.	0.677
CAOG_004847	CAOG_008443	A0A0D2WS33	S4ADI8	Uncharacterized protein.	Uncharacterized protein.	0.989
CAOG_005909	CAOG_004847	A0A0D2WSZ8	A0A0D2WS33	Import inner membrane translocase subunit Tim22.	Uncharacterized protein.	0.677
CAOG_005909	CAOG_008443	A0A0D2WSZ8	S4ADI8	Import inner membrane translocase subunit Tim22.	Uncharacterized protein.	0.809
CAOG_008443	CAOG_004847	S4ADI8	A0A0D2WS33	Uncharacterized protein.	Uncharacterized protein.	0.989
CAOG_008443	CAOG_005909	S4ADI8	A0A0D2WSZ8	Uncharacterized protein.	Import inner membrane translocase subunit Tim22.	0.809