87 items (Capsaspora owczarzaki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CAOG_004745	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (442 aa)
	CAOG_009848	TYR_PHOSPHATASE_2 domain-containing protein; Belongs to the glutamine synthetase family. (1506 aa)
	CAOG_006469	Uncharacterized protein. (341 aa)
	CAOG_005942	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
	CAOG_006715	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (329 aa)
	CAOG_007058	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (639 aa)
	CAOG_007182	RRM domain-containing protein. (535 aa)
	CAOG_007342	Nuclear localization sequence binding protein. (321 aa)
	CAOG_007362	ATP-dependent RNA helicase DBP5. (501 aa)
	CAOG_007383	Uncharacterized protein. (512 aa)
	CAOG_008076	Uncharacterized protein. (1228 aa)
	CAOG_007785	Cleavage stimulation factor. (432 aa)
	CAOG_008375	Serine/threonine protein kinase. (877 aa)
	CAOG_008096	Serine/threonine-protein phosphatase. (303 aa)
	CAOG_000046	Uncharacterized protein. (1095 aa)
	CAOG_000235	WD_REPEATS_REGION domain-containing protein. (757 aa)
	CAOG_000323	Suf domain-containing protein. (787 aa)
	CAOG_000327	RNA-binding protein. (293 aa)
	CAOG_002667	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (413 aa)
	CAOG_003178	Lactamase_B domain-containing protein. (909 aa)
	CAOG_003281	Eukaryotic peptide chain release factor subunit 1. (542 aa)
	CAOG_003500	RRM domain-containing protein. (374 aa)
	CAOG_003554	DNA cross-link repair protein 1B. (729 aa)
	CAOG_003564	Polyadenylate-binding protein. (884 aa)
	CAOG_003653	ZC3H3 protein. (751 aa)
	CAOG_004038	Uncharacterized protein. (977 aa)
	CAOG_004120	WD_REPEATS_REGION domain-containing protein. (670 aa)
	CAOG_004135	Uncharacterized protein. (634 aa)
	CAOG_008779	Tr-type G domain-containing protein. (1185 aa)
	CAOG_008140	Elongation factor Tu. (567 aa)
	CAOG_000014	Nuclear RNA helicase. (433 aa)
	CAOG_000644	Uncharacterized protein. (204 aa)
	CAOG_001010	Zinc finger family protein. (581 aa)
	CAOG_001821	RRM domain-containing protein. (437 aa)
	CAOG_002321	Uncharacterized protein. (824 aa)
	CAOG_008598	WD_REPEATS_REGION domain-containing protein. (324 aa)
	CAOG_002514	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (681 aa)
	CAOG_002659	PWI domain-containing protein. (331 aa)
	CAOG_002696	Uncharacterized protein. (1118 aa)
	CAOG_003062	Mago-bind domain-containing protein. (224 aa)
	CAOG_003505	RNP domain-containing protein. (224 aa)
	CAOG_003662	Uncharacterized protein. (773 aa)
	CAOG_004089	Cleavage and polyadenylation specificity factor 1. (1668 aa)
	CAOG_004727	DEAD-box ATP-dependent RNA helicase 1; Belongs to the DEAD box helicase family. (604 aa)
	CAOG_005064	Integrator complex subunit 11. (661 aa)
	CAOG_006930	Nuclear cap binding protein subunit 2. (359 aa)
	CAOG_007112	MIF4G domain-containing protein. (969 aa)
	CAOG_007605	Zinc finger protein. (167 aa)
	CAOG_007960	RRM domain-containing protein. (304 aa)
	CAOG_008094	Fip1 domain-containing protein. (377 aa)
	CAOG_009309	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (972 aa)
	CAOG_001153	Cleavage and polyadenylation specificity factor subunit 2. (838 aa)
	CAOG_001262	Uncharacterized protein. (77 aa)
	CAOG_001837	Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (435 aa)
	CAOG_002563	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (336 aa)
	CAOG_008730	Uncharacterized protein. (1120 aa)
	CAOG_004396	NTF2 domain-containing protein. (129 aa)
	CAOG_004560	Uncharacterized protein. (1768 aa)
	CAOG_004728	Mago nashi protein. (202 aa)
	CAOG_005464	RNA-dependent RNA polymerase. (1261 aa)
	CAOG_006466	Serine/threonine-protein phosphatase 4 regulatory subunit 1. (863 aa)
	CAOG_006745	Protein phosphatase 2. (590 aa)
	CAOG_007016	RNA binding domain-containing protein. (135 aa)
	CAOG_007187	mRNA cap guanine-N7 methyltransferase. (524 aa)
	CAOG_007855	Uncharacterized protein. (161 aa)
	CAOG_008074	MJ1316 domain-containing protein. (237 aa)
	CAOG_000291	Smg4_UPF3 domain-containing protein. (465 aa)
	CAOG_000508	Uncharacterized protein. (619 aa)
	CAOG_000748	CPSF3 protein. (788 aa)
	CAOG_000659	CID domain-containing protein. (603 aa)
	CAOG_001435	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (198 aa)
	CAOG_000974	Uncharacterized protein. (443 aa)
	CAOG_001337	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (608 aa)
	CAOG_001603	Uncharacterized protein. (404 aa)
	CAOG_002356	RING-type domain-containing protein. (374 aa)
	CAOG_008555	Uncharacterized protein. (174 aa)
	CAOG_008558	TAP-C domain-containing protein. (730 aa)
	CAOG_002710	Translation releasing factor eRF-1. (436 aa)
	CAOG_002302	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (662 aa)
	CAOG_003615	Ssu72 protein. (192 aa)
	CAOG_004064	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3969 aa)
	CAOG_004072	Uncharacterized protein. (1430 aa)
	CAOG_004121	Twinfilin-1. (344 aa)
	CAOG_003595	Constitutive photomorphogenic 9 complex chain AJH2. (357 aa)
	CAOG_003768	Uncharacterized protein. (140 aa)
	CAOG_004762	LisH domain-containing protein. (1092 aa)
	CAOG_004546	Uncharacterized protein. (611 aa)

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_000014	CAOG_000291	A0A0D2TZH7	A0A0D2WGU5	Nuclear RNA helicase.	Smg4_UPF3 domain-containing protein.	0.926
CAOG_000014	CAOG_000323	A0A0D2TZH7	A0A0D2X0A7	Nuclear RNA helicase.	Suf domain-containing protein.	0.733
CAOG_000014	CAOG_000644	A0A0D2TZH7	A0A0D2U1N9	Nuclear RNA helicase.	Uncharacterized protein.	0.656
CAOG_000014	CAOG_000659	A0A0D2TZH7	A0A0D2WIZ0	Nuclear RNA helicase.	CID domain-containing protein.	0.799
CAOG_000014	CAOG_001435	A0A0D2TZH7	A0A0D2WJ88	Nuclear RNA helicase.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.681
CAOG_000014	CAOG_001821	A0A0D2TZH7	A0A0D2U5V9	Nuclear RNA helicase.	RRM domain-containing protein.	0.513
CAOG_000014	CAOG_001837	A0A0D2TZH7	A0A0D2VKI7	Nuclear RNA helicase.	Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.	0.609
CAOG_000014	CAOG_002302	A0A0D2TZH7	A0A0D2WM38	Nuclear RNA helicase.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.561
CAOG_000014	CAOG_002659	A0A0D2TZH7	A0A0D2U8Y8	Nuclear RNA helicase.	PWI domain-containing protein.	0.851
CAOG_000014	CAOG_002667	A0A0D2TZH7	A0A0D2X1W9	Nuclear RNA helicase.	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.	0.971
CAOG_000014	CAOG_003500	A0A0D2TZH7	A0A0D2X2H2	Nuclear RNA helicase.	RRM domain-containing protein.	0.555
CAOG_000014	CAOG_003505	A0A0D2TZH7	A0A0D2UC17	Nuclear RNA helicase.	RNP domain-containing protein.	0.800
CAOG_000014	CAOG_003564	A0A0D2TZH7	A0A0D2X2J0	Nuclear RNA helicase.	Polyadenylate-binding protein.	0.561
CAOG_000014	CAOG_003662	A0A0D2TZH7	A0A0D2UCJ5	Nuclear RNA helicase.	Uncharacterized protein.	0.528
CAOG_000014	CAOG_004072	A0A0D2TZH7	A0A0D2WPG1	Nuclear RNA helicase.	Uncharacterized protein.	0.524
CAOG_000014	CAOG_004121	A0A0D2TZH7	A0A0D2WPI5	Nuclear RNA helicase.	Twinfilin-1.	0.546
CAOG_000014	CAOG_004396	A0A0D2TZH7	A0A0D2VRU9	Nuclear RNA helicase.	NTF2 domain-containing protein.	0.710
CAOG_000014	CAOG_004560	A0A0D2TZH7	A0A0D2VS29	Nuclear RNA helicase.	Uncharacterized protein.	0.451
CAOG_000014	CAOG_004728	A0A0D2TZH7	A0A0D2VSG3	Nuclear RNA helicase.	Mago nashi protein.	0.919
CAOG_000014	CAOG_006469	A0A0D2TZH7	A0A0D2WU61	Nuclear RNA helicase.	Uncharacterized protein.	0.745