STRINGSTRING
glsA glsA ADU34386.1 ADU34386.1 ADU34534.1 ADU34534.1 ADU34546.1 ADU34546.1 proA proA ADU34838.1 ADU34838.1 ADU35302.1 ADU35302.1 ADU35319.1 ADU35319.1 ADU35421.1 ADU35421.1 ADU35454.1 ADU35454.1 ADU35455.1 ADU35455.1 ADU35951.1 ADU35951.1 ADU35952.1 ADU35952.1 ADU35960.1 ADU35960.1 ADU36006.1 ADU36006.1 ADU36589.1 ADU36589.1 ADU36724.1 ADU36724.1 ADU37570.1 ADU37570.1 ADU37576.1 ADU37576.1 acsA acsA murI murI ADU37904.1 ADU37904.1 ADU37944.1 ADU37944.1 ADU37945.1 ADU37945.1 ADU38084.1 ADU38084.1 ADU38508.1 ADU38508.1 ADU38555.1 ADU38555.1 ackA ackA ADU38571.1 ADU38571.1 ADU38956.1 ADU38956.1 proB proB ADU39525.1 ADU39525.1 ADU39604.1 ADU39604.1 ADU39625.1 ADU39625.1 ADU39631.1 ADU39631.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glsATIGRFAM: Glutaminase, core; KEGG: vap:Vapar_0137 glutaminase; PFAM: Glutaminase, core; Belongs to the glutaminase family. (310 aa)
ADU34386.1PFAM: glutamine synthetase catalytic region; KEGG: pol:Bpro_5153 L-glutamine synthetase. (484 aa)
ADU34534.1KEGG: vap:Vapar_3271 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase. (505 aa)
ADU34546.1PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_0310 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (512 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (431 aa)
ADU34838.1PFAM: Aldehyde Dehydrogenase; KEGG: rhi:NGR_b06980 aldehyde dehydrogenase. (472 aa)
ADU35302.1PFAM: Aldehyde Dehydrogenase; KEGG: bbt:BBta_7827 putative membrane-anchored aldehyde dehydrogenase protein; Belongs to the aldehyde dehydrogenase family. (809 aa)
ADU35319.1Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1251 aa)
ADU35421.1TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bpt:Bpet2917 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (416 aa)
ADU35454.1KEGG: vap:Vapar_1152 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein. (1584 aa)
ADU35455.1KEGG: vap:Vapar_1153 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (492 aa)
ADU35951.1KEGG: bcj:BCAM1442 putative methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase. (545 aa)
ADU35952.1PFAM: aminotransferase class-III; KEGG: vap:Vapar_1578 beta alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)
ADU35960.1TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: vap:Vapar_1586 amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20. (426 aa)
ADU36006.1KEGG: vap:Vapar_1632 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. (471 aa)
ADU36589.1KEGG: vap:Vapar_3257 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase. (507 aa)
ADU36724.1PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_2344 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (477 aa)
ADU37570.1KEGG: vap:Vapar_2541 nitrilase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase. (344 aa)
ADU37576.1PFAM: AMP-dependent synthetase and ligase; KEGG: vap:Vapar_2538 malonyl-CoA synthase. (516 aa)
acsAacetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (665 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (265 aa)
ADU37904.1propionate/CoA ligase; KEGG: vap:Vapar_2170 propionyl-CoA synthetase; TIGRFAM: propionate/CoA ligase; PFAM: AMP-dependent synthetase and ligase. (637 aa)
ADU37944.1KEGG: vap:Vapar_2131 acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein. (682 aa)
ADU37945.1PFAM: carboxyl transferase; KEGG: vap:Vapar_2130 carboxyl transferase. (514 aa)
ADU38084.1PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: vap:Vapar_6147 CoA-binding domain protein. (706 aa)
ADU38508.1PFAM: Aldehyde Dehydrogenase; KEGG: pfl:PFL_3648 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. (482 aa)
ADU38555.1KEGG: vap:Vapar_3808 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase. (328 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (399 aa)
ADU38571.1KEGG: vap:Vapar_3825 sulfoacetaldehyde acetyltransferase; TIGRFAM: sulfoacetaldehyde acetyltransferase; PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; Belongs to the TPP enzyme family. (607 aa)
ADU38956.1PFAM: Na+/solute symporter; KEGG: vap:Vapar_4125 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (482 aa)
proBGlutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (370 aa)
ADU39525.1PFAM: Amidase; KEGG: dar:Daro_1337 indole acetimide hydrolase; Belongs to the amidase family. (504 aa)
ADU39604.1PFAM: aminotransferase class-III; KEGG: vap:Vapar_4788 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
ADU39625.1PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: vap:Vapar_4808 Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (423 aa)
ADU39631.1KEGG: vap:Vapar_4815 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding. (302 aa)
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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