STRINGSTRING
minE minE ADU34297.1 ADU34297.1 minC minC ADU34300.1 ADU34300.1 ADU34301.1 ADU34301.1 ADU34324.1 ADU34324.1 amiE amiE gatB gatB gatA gatA gatC gatC ADU35067.1 ADU35067.1 ADU35107.1 ADU35107.1 ADU35358.1 ADU35358.1 ADU35684.1 ADU35684.1 ADU36025.1 ADU36025.1 ADU36026.1 ADU36026.1 ADU36027.1 ADU36027.1 ADU36596.1 ADU36596.1 ADU37513.1 ADU37513.1 ADU37514.1 ADU37514.1 ADU37657.1 ADU37657.1 ADU37991.1 ADU37991.1 ADU38330.1 ADU38330.1 ADU39111.1 ADU39111.1 ADU39112.1 ADU39112.1 ADU39113.1 ADU39113.1 ADU39114.1 ADU39114.1 ADU39502.1 ADU39502.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
minECell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. (90 aa)
ADU34297.1TIGRFAM: septum site-determining protein MinD; KEGG: vap:Vapar_0066 septum site-determining protein MinD. (271 aa)
minCSeptum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. (255 aa)
ADU34300.1PFAM: thioesterase superfamily protein; KEGG: vap:Vapar_0069 thioesterase superfamily protein. (140 aa)
ADU34301.1KEGG: vap:Vapar_0070 hypothetical protein. (447 aa)
ADU34324.1KEGG: vap:Vapar_0089 benzoate-CoA ligase family; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase. (515 aa)
amiENitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates. (345 aa)
gatBglutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (496 aa)
gatAglutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (497 aa)
gatCglutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (99 aa)
ADU35067.1PFAM: Amidase; KEGG: vap:Vapar_0825 amidase. (480 aa)
ADU35107.1PFAM: Amidase; KEGG: vap:Vapar_0848 amidase; Belongs to the amidase family. (392 aa)
ADU35358.1PFAM: major facilitator superfamily MFS_1; KEGG: vap:Vapar_1067 major facilitator superfamily MFS_1. (422 aa)
ADU35684.1PFAM: Amidase; KEGG: cti:RALTA_A1447 amidase; Belongs to the amidase family. (449 aa)
ADU36025.1TIGRFAM: nitrile hydratase, alpha subunit; KEGG: vap:Vapar_1665 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain. (225 aa)
ADU36026.1Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family. (221 aa)
ADU36027.1KEGG: vap:Vapar_1667 hypothetical protein. (121 aa)
ADU36596.1PFAM: Amidase; KEGG: bra:BRADO4407 putative amidase. (479 aa)
ADU37513.1PFAM: Amidase; KEGG: vap:Vapar_2598 amidase. (441 aa)
ADU37514.1KEGG: vap:Vapar_2597 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase. (417 aa)
ADU37657.1PFAM: Amidase; KEGG: reh:H16_A2086 amidase. (461 aa)
ADU37991.1PFAM: Aldehyde Dehydrogenase; KEGG: bpr:GBP346_A4247 phenylacetaldehyde dehydrogenase (PAD); Belongs to the aldehyde dehydrogenase family. (498 aa)
ADU38330.1KEGG: vap:Vapar_3615 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain. (606 aa)
ADU39111.1KEGG: vap:Vapar_0710 hypothetical protein. (329 aa)
ADU39112.1PFAM: Amidase; KEGG: vap:Vapar_0709 amidase. (521 aa)
ADU39113.1PFAM: transcription elongation factor GreA/GreB domain-containing protein; KEGG: vap:Vapar_6013 GreA/GreB family elongation factor. (135 aa)
ADU39114.1PFAM: UspA domain-containing protein; KEGG: vap:Vapar_6021 UspA domain protein. (286 aa)
ADU39502.1PFAM: acylphosphatase; KEGG: vap:Vapar_4711 acylphosphatase. (103 aa)
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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