STRINGSTRING
ADU35257.1 ADU35257.1 ADU35258.1 ADU35258.1 ADU35259.1 ADU35259.1 ADU35260.1 ADU35260.1 ADU36709.1 ADU36709.1 ADU36710.1 ADU36710.1 ADU36711.1 ADU36711.1 ADU36879.1 ADU36879.1 ADU38598.1 ADU38598.1 ADU38599.1 ADU38599.1 ADU38600.1 ADU38600.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADU35257.1KEGG: vap:Vapar_0978 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA. (296 aa)
ADU35258.1KEGG: hse:Hsero_0057 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein. (336 aa)
ADU35259.1ABC transporter related protein; KEGG: mms:mma_2484 sulfonate/nitrate transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (290 aa)
ADU35260.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mms:mma_2483 ABC-type sulfonate/nitrate transport system permease protein. (289 aa)
ADU36709.1Hypothetical protein; KEGG: vap:Vapar_2334 putative signal peptide protein. (344 aa)
ADU36710.1KEGG: vap:Vapar_2335 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (271 aa)
ADU36711.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_2336 binding-protein-dependent transport systems inner membrane component. (277 aa)
ADU36879.1KEGG: cti:RALTA_B2000 taurine dioxygenase, 2-oxoglutarate-dependent; PFAM: Taurine catabolism dioxygenase TauD/TfdA. (317 aa)
ADU38598.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_3844 binding-protein-dependent transport systems inner membrane component. (296 aa)
ADU38599.1KEGG: vap:Vapar_3845 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (262 aa)
ADU38600.1KEGG: vap:Vapar_3846 taurine ABC transporter, periplasmic binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3. (336 aa)
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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