STRINGSTRING
ADU39112.1 ADU39112.1 ADU34493.1 ADU34493.1 gatA gatA ADU35067.1 ADU35067.1 ADU35684.1 ADU35684.1 ADU36596.1 ADU36596.1 ADU36835.1 ADU36835.1 ADU37513.1 ADU37513.1 ADU37657.1 ADU37657.1 ADU38509.1 ADU38509.1 ADU39169.1 ADU39169.1 ADU39525.1 ADU39525.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADU39112.1PFAM: Amidase; KEGG: vap:Vapar_0709 amidase. (521 aa)
ADU34493.1KEGG: vap:Vapar_0265 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase. (571 aa)
gatAglutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (497 aa)
ADU35067.1PFAM: Amidase; KEGG: vap:Vapar_0825 amidase. (480 aa)
ADU35684.1PFAM: Amidase; KEGG: cti:RALTA_A1447 amidase; Belongs to the amidase family. (449 aa)
ADU36596.1PFAM: Amidase; KEGG: bra:BRADO4407 putative amidase. (479 aa)
ADU36835.1PFAM: Amidase; KEGG: dac:Daci_2093 hypothetical protein. (488 aa)
ADU37513.1PFAM: Amidase; KEGG: vap:Vapar_2598 amidase. (441 aa)
ADU37657.1PFAM: Amidase; KEGG: reh:H16_A2086 amidase. (461 aa)
ADU38509.1PFAM: Amidase; KEGG: vap:Vapar_4356 amidase. (466 aa)
ADU39169.1PFAM: Amidase; KEGG: vap:Vapar_4356 amidase. (470 aa)
ADU39525.1PFAM: Amidase; KEGG: dar:Daro_1337 indole acetimide hydrolase; Belongs to the amidase family. (504 aa)
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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