STRINGSTRING
ADU37078.1 ADU37078.1 ADU37079.1 ADU37079.1 ADU38493.1 ADU38493.1 ADU38494.1 ADU38494.1 ADU38496.1 ADU38496.1 ADU38686.1 ADU38686.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADU37078.1KEGG: vap:Vapar_3185 amino acid adenylation domain protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding. (1696 aa)
ADU37079.1KEGG: vap:Vapar_3184 amino acid adenylation domain protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; aminotransferase class-III. (2453 aa)
ADU38493.1Manually curated; TIGRFAM: amino acid adenylation domain protein; KEGG: dac:Daci_4753 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase. (4633 aa)
ADU38494.1Amino acid adenylation domain protein; KEGG: xal:XALc_1551 probable non-ribosomal peptide synthetase protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding. (4313 aa)
ADU38496.1KEGG: vap:Vapar_3746 amino acid adenylation domain protein; TIGRFAM: amino acid adenylation domain protein; PFAM: condensation domain protein; AMP-dependent synthetase and ligase; phosphopantetheine-binding. (1766 aa)
ADU38686.1Amino acid adenylation domain protein; KEGG: bsu:BSU31960 siderophore 2,3-dihydroxybenzoate-glycine-threonine trimeric ester bacillibactin synthetase; TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Male sterility domain. (2491 aa)
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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