STRINGSTRING
ADU34333.1 ADU34333.1 ADU34450.1 ADU34450.1 ADU35782.1 ADU35782.1 ADU36655.1 ADU36655.1 ADU36678.1 ADU36678.1 ADU36812.1 ADU36812.1 ADU37345.1 ADU37345.1 ADU37795.1 ADU37795.1 ADU37799.1 ADU37799.1 ADU37803.1 ADU37803.1 ADU37938.1 ADU37938.1 queG queG nuoI nuoI ADU38567.1 ADU38567.1 ADU39162.1 ADU39162.1 ADU39339.1 ADU39339.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADU34333.1KEGG: vap:Vapar_0095 benzoyl-CoA oxygenase/reductase, BoxA protein; TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein. (429 aa)
ADU34450.1PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: vap:Vapar_0224 glycolate oxidase iron-sulfur subunit. (417 aa)
ADU35782.1KEGG: vap:Vapar_1427 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein. (233 aa)
ADU36655.1KEGG: vap:Vapar_5479 glutamate synthase (NADPH); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (599 aa)
ADU36678.1Ferredoxin; KEGG: mlo:msr9193 ferredoxin. (77 aa)
ADU36812.14Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (109 aa)
ADU37345.1KEGG: vap:Vapar_2904 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein. (1028 aa)
ADU37795.1KEGG: vap:Vapar_4072 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (957 aa)
ADU37799.1KEGG: vap:Vapar_4065 4Fe-4S ferredoxin iron-sulfur binding domain protein. (692 aa)
ADU37803.1KEGG: vap:Vapar_4061 4Fe-4S ferredoxin iron-sulfur binding domain protein. (206 aa)
ADU37938.1Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. (211 aa)
queGIron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (359 aa)
nuoINADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (181 aa)
ADU38567.1KEGG: vap:Vapar_3814 4Fe-4S ferredoxin iron-sulfur binding domain protein. (276 aa)
ADU39162.1KEGG: vap:Vapar_4349 4Fe-4S ferredoxin, iron-sulfur binding. (94 aa)
ADU39339.1KEGG: vap:Vapar_3019 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molydopterin dinucleotide-binding region. (958 aa)
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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