STRINGSTRING
ADU34479.1 ADU34479.1 ADU34551.1 ADU34551.1 ADU34553.1 ADU34553.1 ADU35391.1 ADU35391.1 ADU35421.1 ADU35421.1 ADU35893.1 ADU35893.1 ADU35925.1 ADU35925.1 ADU35960.1 ADU35960.1 ADU36165.1 ADU36165.1 ADU36334.1 ADU36334.1 ADU36605.1 ADU36605.1 ADU40151.1 ADU40151.1 dapE dapE ADU37371.1 ADU37371.1 ADU38708.1 ADU38708.1 ADU38709.1 ADU38709.1 ADU38778.1 ADU38778.1 ADU38908.1 ADU38908.1 ADU39528.1 ADU39528.1 ADU40107.1 ADU40107.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADU34479.1Amidohydrolase; KEGG: rpf:Rpic12D_1452 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (404 aa)
ADU34551.1TIGRFAM: amidohydrolase; KEGG: vap:Vapar_0333 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (401 aa)
ADU34553.1KEGG: vap:Vapar_0331 acetylornithine deacetylase (ArgE); TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein. (388 aa)
ADU35391.1TIGRFAM: amidohydrolase; KEGG: vap:Vapar_1090 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (428 aa)
ADU35421.1TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bpt:Bpet2917 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (416 aa)
ADU35893.1PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: vap:Vapar_1543 glutamate carboxypeptidase. (427 aa)
ADU35925.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_1560 glutamate carboxypeptidase. (422 aa)
ADU35960.1TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: vap:Vapar_1586 amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20. (426 aa)
ADU36165.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_1781 hypothetical protein. (454 aa)
ADU36334.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_5278 peptidase M20. (450 aa)
ADU36605.1Dipeptidase; KEGG: rpf:Rpic12D_1237 hypothetical protein; TIGRFAM: dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein. (578 aa)
ADU40151.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_5278 peptidase M20. (452 aa)
dapESuccinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (391 aa)
ADU37371.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_2924 hypothetical protein. (491 aa)
ADU38708.1TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; KEGG: vap:Vapar_3928 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; peptidase M20; peptidase dimerisation domain protein. (592 aa)
ADU38709.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_3929 peptidase M20. (408 aa)
ADU38778.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pfs:PFLU3649 glutamate carboxypeptidase. (423 aa)
ADU38908.1TIGRFAM: amidohydrolase; KEGG: bvi:Bcep1808_6694 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (389 aa)
ADU39528.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_4731 peptidase M20. (416 aa)
ADU40107.1TIGRFAM: amidohydrolase; KEGG: vap:Vapar_5224 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (401 aa)
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.