STRINGSTRING
ADU36165.1 ADU36165.1 ADU36334.1 ADU36334.1 ADU38708.1 ADU38708.1 ADU38778.1 ADU38778.1 ADU40151.1 ADU40151.1 ADU39528.1 ADU39528.1 ADU35421.1 ADU35421.1 ADU35893.1 ADU35893.1 ADU35925.1 ADU35925.1 ADU35960.1 ADU35960.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ADU36165.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_1781 hypothetical protein. (454 aa)
ADU36334.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_5278 peptidase M20. (450 aa)
ADU38708.1TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; KEGG: vap:Vapar_3928 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; peptidase M20; peptidase dimerisation domain protein. (592 aa)
ADU38778.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pfs:PFLU3649 glutamate carboxypeptidase. (423 aa)
ADU40151.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_5278 peptidase M20. (452 aa)
ADU39528.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_4731 peptidase M20. (416 aa)
ADU35421.1TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bpt:Bpet2917 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (416 aa)
ADU35893.1PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: vap:Vapar_1543 glutamate carboxypeptidase. (427 aa)
ADU35925.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_1560 glutamate carboxypeptidase. (422 aa)
ADU35960.1TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: vap:Vapar_1586 amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20. (426 aa)
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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