STRINGSTRING
EIG51885.1 EIG51885.1 EIG51886.1 EIG51886.1 EIG51941.1 EIG51941.1 EIG51970.1 EIG51970.1 EIG52018.1 EIG52018.1 EIG52019.1 EIG52019.1 EIG52260.1 EIG52260.1 EIG52436.1 EIG52436.1 EIG52476.1 EIG52476.1 EIG52748.1 EIG52748.1 secF secF EIG53081.1 EIG53081.1 EIG53204.1 EIG53204.1 secD secD EIG53335.1 EIG53335.1 EIG53457.1 EIG53457.1 EIG53486.1 EIG53486.1 EIG53528.1 EIG53528.1 EIG53529.1 EIG53529.1 secE secE EIG54481.1 EIG54481.1 EIG54495.1 EIG54495.1 secA secA EIG54573.1 EIG54573.1 EIG55170.1 EIG55170.1 secY secY EIG55337.1 EIG55337.1 EIG55372.1 EIG55372.1 EIG55422.1 EIG55422.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EIG51885.1Peroxiredoxin; PFAM: AhpC/TSA family. (195 aa)
EIG51886.1Peroxiredoxin; PFAM: AhpC/TSA family. (205 aa)
EIG51941.1Zn-dependent alcohol dehydrogenase, class III; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase. (364 aa)
EIG51970.1Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (235 aa)
EIG52018.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (281 aa)
EIG52019.1ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (332 aa)
EIG52260.1PFAM: Thioredoxin. (144 aa)
EIG52436.1Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (171 aa)
EIG52476.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter. (846 aa)
EIG52748.1Peroxiredoxin; PFAM: AhpC/TSA family. (221 aa)
secFProtein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (363 aa)
EIG53081.1Protein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (133 aa)
EIG53204.1Ferritin-like protein; Iron-storage protein. (170 aa)
secDProtein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (534 aa)
EIG53335.1Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (301 aa)
EIG53457.1PFAM: Bacterial mobilisation protein (MobC); Protein of unknown function (DUF1778). (127 aa)
EIG53486.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter. (589 aa)
EIG53528.1PFAM: Pyridine nucleotide-disulphide oxidoreductase. (309 aa)
EIG53529.1PFAM: Thioredoxin; Belongs to the thioredoxin family. (106 aa)
secEPreprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (103 aa)
EIG54481.1Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (217 aa)
EIG54495.1Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: Glutaredoxin-like domain protein; thioredoxin-disulfide reductase. (566 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (837 aa)
EIG54573.1Hypothetical protein; PFAM: Carboxymuconolactone decarboxylase family. (181 aa)
EIG55170.1ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region. (601 aa)
secYPreprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (437 aa)
EIG55337.1ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle. (557 aa)
EIG55372.1PFAM: Plasmid pRiA4b ORF-3-like protein; manually curated. (190 aa)
EIG55422.1Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (198 aa)
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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