STRINGSTRING
SSH2 SSH2 DNASE1L3 DNASE1L3 LRRK1 LRRK1 CFL2 CFL2 LOC100219136 LOC100219136 SSH1 SSH1 MALRD1 MALRD1 TESK1 TESK1 TPBG TPBG SSH3 SSH3 PDZRN4 PDZRN4 LIMK2 LIMK2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SSH2Slingshot protein phosphatase 2. (1436 aa)
DNASE1L3Deoxyribonuclease; Belongs to the DNase I family. (332 aa)
LRRK1Leucine rich repeat kinase 1. (1998 aa)
CFL2Cofilin 2; Belongs to the actin-binding proteins ADF family. (166 aa)
LOC100219136PIP49_C domain-containing protein. (518 aa)
SSH1Slingshot protein phosphatase 1. (1065 aa)
MALRD1Uncharacterized protein. (1993 aa)
TESK1Testis associated actin remodelling kinase 1. (692 aa)
TPBGUncharacterized protein. (373 aa)
SSH3LOW QUALITY PROTEIN: protein phosphatase Slingshot homolog 3. (601 aa)
PDZRN4PDZ domain containing ring finger 4. (1087 aa)
LIMK2LIM domain kinase 2. (642 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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