STRINGSTRING
SRSF4 SRSF4 HNRNPM HNRNPM PTBP3 PTBP3 ENSTGUP00000002155 ENSTGUP00000002155 RBMX RBMX TPRG1L TPRG1L TRA2A TRA2A HNRNPD HNRNPD TARDBP TARDBP H0YYQ9_TAEGU H0YYQ9_TAEGU RALY RALY TAF15 TAF15 PCBP4 PCBP4 ZRSR2 ZRSR2 ENSTGUP00000008419 ENSTGUP00000008419 HNRNPU HNRNPU RAVER2-2 RAVER2-2 TIAL1 TIAL1 SRSF5 SRSF5 YBX3 YBX3 SYNCRIP SYNCRIP YBX1 YBX1 CELF2 CELF2 HNRNPAB HNRNPAB CIRBP CIRBP HNRNPA1 HNRNPA1 HNRNPH3 HNRNPH3 MBNL1 MBNL1 SREK1 SREK1 HNRNPUL2 HNRNPUL2 ENSTGUP00000020678 ENSTGUP00000020678 ENSTGUP00000021904 ENSTGUP00000021904 ENSTGUP00000022480 ENSTGUP00000022480 PTBP1 PTBP1 SRSF2 SRSF2 ENSTGUP00000023587 ENSTGUP00000023587 ENSTGUP00000023826 ENSTGUP00000023826 U2AF2 U2AF2 LOC100220017 LOC100220017 ENSTGUP00000024438 ENSTGUP00000024438 U2AF1 U2AF1 SRSF7 SRSF7 TRA2B TRA2B HNRNPA3 HNRNPA3 PABPN1L PABPN1L HNRNPL HNRNPL ENSTGUP00000026202 ENSTGUP00000026202 PTBP2 PTBP2 LOC115492038 LOC115492038 SRSF1 SRSF1 HNRNPDL HNRNPDL EWSR1 EWSR1 HNRNPH1 HNRNPH1 MBNL3 MBNL3 CELF1 CELF1 HNRNPK HNRNPK SRSF6 SRSF6 ENSTGUP00000030720 ENSTGUP00000030720 SRSF11 SRSF11 SRSF10 SRSF10 ENSTGUP00000033403 ENSTGUP00000033403 ENSTGUP00000034180 ENSTGUP00000034180 SNRNP70 SNRNP70 HNRNPA2B1 HNRNPA2B1 ENSTGUP00000036334 ENSTGUP00000036334 SRPK1 SRPK1 ZRANB2 ZRANB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SRSF4Serine and arginine rich splicing factor 4. (461 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (867 aa)
PTBP3Polypyrimidine tract binding protein 3. (517 aa)
ENSTGUP00000002155annotation not available (261 aa)
RBMXRRM domain-containing protein. (385 aa)
TPRG1LTumor protein p63 regulated 1 like. (273 aa)
TRA2ATransformer 2 alpha homolog. (276 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (511 aa)
TARDBPTAR DNA binding protein. (414 aa)
H0YYQ9_TAEGUUncharacterized protein. (342 aa)
RALYRALY heterogeneous nuclear ribonucleoprotein. (432 aa)
TAF15TATA-box binding protein associated factor 15. (471 aa)
PCBP4Poly(rC) binding protein 4. (420 aa)
ZRSR2Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (415 aa)
ENSTGUP00000008419annotation not available (269 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (841 aa)
RAVER2-2Ribonucleoprotein, PTB binding 2. (699 aa)
TIAL1TIA1 cytotoxic granule associated RNA binding protein like 1. (395 aa)
SRSF5Serine and arginine rich splicing factor 5. (265 aa)
YBX3Y-box-binding protein 3 isoform X1. (186 aa)
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X1. (562 aa)
YBX1Y-box binding protein 1. (324 aa)
CELF2CUGBP Elav-like family member 2. (567 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (394 aa)
CIRBPRRM domain-containing protein. (204 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1/A3. (288 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (419 aa)
MBNL1Muscleblind like splicing regulator 1. (421 aa)
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (465 aa)
HNRNPUL2Heterogeneous nuclear ribonucleoprotein U like 2. (786 aa)
ENSTGUP00000020678annotation not available (333 aa)
ENSTGUP00000021904annotation not available (702 aa)
ENSTGUP00000022480annotation not available (246 aa)
PTBP1Polypyrimidine tract binding protein 1. (566 aa)
SRSF2RRM domain-containing protein. (221 aa)
ENSTGUP00000023587annotation not available (206 aa)
ENSTGUP00000023826annotation not available (100 aa)
U2AF2U2 small nuclear RNA auxiliary factor 2. (478 aa)
LOC100220017Uncharacterized protein. (478 aa)
ENSTGUP00000024438annotation not available (611 aa)
U2AF1Putative U2 snRNP auxiliary factor small subunit variant 1. (270 aa)
SRSF7Uncharacterized protein. (421 aa)
TRA2BRRM domain-containing protein. (291 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (387 aa)
PABPN1LUncharacterized protein. (244 aa)
HNRNPLRRM domain-containing protein. (185 aa)
ENSTGUP00000026202annotation not available (290 aa)
PTBP2Polypyrimidine tract binding protein 2. (564 aa)
LOC115492038Heterogeneous nuclear ribonucleoprotein U-like protein 2. (787 aa)
SRSF1RRM domain-containing protein. (256 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D like. (323 aa)
EWSR1EWS RNA binding protein 1. (738 aa)
HNRNPH1Uncharacterized protein. (568 aa)
MBNL3Muscleblind like splicing regulator 3. (436 aa)
CELF1CUGBP Elav-like family member 1. (532 aa)
HNRNPKHeterogeneous nuclear ribonucleoprotein K. (432 aa)
SRSF6Serine and arginine rich splicing factor 6. (348 aa)
ENSTGUP00000030720annotation not available (330 aa)
SRSF11Serine and arginine rich splicing factor 11. (424 aa)
SRSF10Serine and arginine rich splicing factor 10. (260 aa)
ENSTGUP00000033403annotation not available (446 aa)
ENSTGUP00000034180annotation not available (276 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa-like. (428 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (349 aa)
ENSTGUP00000036334annotation not available (167 aa)
SRPK1SRSF protein kinase 1. (667 aa)
ZRANB2Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (332 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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