53 items (Taeniopygia guttata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SRSF4	Serine and arginine rich splicing factor 4. (461 aa)
	HNRNPM	Heterogeneous nuclear ribonucleoprotein M. (867 aa)
	PTBP3	Polypyrimidine tract binding protein 3. (517 aa)
	ENSTGUP00000002155	annotation not available (261 aa)
	RBMX	RRM domain-containing protein. (385 aa)
	TPRG1L	Tumor protein p63 regulated 1 like. (273 aa)
	TRA2A	Transformer 2 alpha homolog. (276 aa)
	HNRNPD	Heterogeneous nuclear ribonucleoprotein D. (511 aa)
	TARDBP	TAR DNA binding protein. (414 aa)
	TAF15	TATA-box binding protein associated factor 15. (471 aa)
	ZRSR2	Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (415 aa)
	HNRNPU	Heterogeneous nuclear ribonucleoprotein U. (841 aa)
	TIAL1	TIA1 cytotoxic granule associated RNA binding protein like 1. (395 aa)
	SRSF5	Serine and arginine rich splicing factor 5. (265 aa)
	SYNCRIP	Heterogeneous nuclear ribonucleoprotein Q isoform X1. (562 aa)
	YBX1	Y-box binding protein 1. (324 aa)
	HNRNPAB	Heterogeneous nuclear ribonucleoprotein A/B. (394 aa)
	CIRBP	RRM domain-containing protein. (204 aa)
	HNRNPA1	Heterogeneous nuclear ribonucleoprotein A1/A3. (288 aa)
	HNRNPH3	Heterogeneous nuclear ribonucleoprotein H3. (419 aa)
	SREK1	Splicing regulatory glutamic acid and lysine rich protein 1. (465 aa)
	HNRNPUL2	Heterogeneous nuclear ribonucleoprotein U like 2. (786 aa)
	ENSTGUP00000020678	annotation not available (333 aa)
	ENSTGUP00000021904	annotation not available (702 aa)
	ENSTGUP00000022480	annotation not available (246 aa)
	PTBP1	Polypyrimidine tract binding protein 1. (566 aa)
	SRSF2	RRM domain-containing protein. (221 aa)
	ENSTGUP00000023587	annotation not available (206 aa)
	ENSTGUP00000023826	annotation not available (100 aa)
	U2AF2	U2 small nuclear RNA auxiliary factor 2. (478 aa)
	LOC100220017	Uncharacterized protein. (478 aa)
	ENSTGUP00000024438	annotation not available (611 aa)
	U2AF1	Putative U2 snRNP auxiliary factor small subunit variant 1. (270 aa)
	SRSF7	Uncharacterized protein. (421 aa)
	TRA2B	RRM domain-containing protein. (291 aa)
	HNRNPA3	Heterogeneous nuclear ribonucleoprotein A3. (387 aa)
	PABPN1L	Uncharacterized protein. (244 aa)
	HNRNPL	RRM domain-containing protein. (185 aa)
	PTBP2	Polypyrimidine tract binding protein 2. (564 aa)
	LOC115492038	Heterogeneous nuclear ribonucleoprotein U-like protein 2. (787 aa)
	SRSF1	RRM domain-containing protein. (256 aa)
	HNRNPDL	Heterogeneous nuclear ribonucleoprotein D like. (323 aa)
	EWSR1	EWS RNA binding protein 1. (738 aa)
	HNRNPH1	Uncharacterized protein. (568 aa)
	HNRNPK	Heterogeneous nuclear ribonucleoprotein K. (432 aa)
	SRSF6	Serine and arginine rich splicing factor 6. (348 aa)
	SRSF11	Serine and arginine rich splicing factor 11. (424 aa)
	SRSF10	Serine and arginine rich splicing factor 10. (260 aa)
	ENSTGUP00000034180	annotation not available (276 aa)
	SNRNP70	U1 small nuclear ribonucleoprotein 70 kDa-like. (428 aa)
	HNRNPA2B1	Heterogeneous nuclear ribonucleoprotein A2/B1. (349 aa)
	ENSTGUP00000036334	annotation not available (167 aa)
	SRPK1	SRSF protein kinase 1. (667 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIRBP	ENSTGUP00000002155	ENSTGUP00000019619	ENSTGUP00000002155	RRM domain-containing protein.	annotation not available	0.404
CIRBP	ENSTGUP00000034180	ENSTGUP00000019619	ENSTGUP00000034180	RRM domain-containing protein.	annotation not available	0.416
CIRBP	EWSR1	ENSTGUP00000019619	ENSTGUP00000028868	RRM domain-containing protein.	EWS RNA binding protein 1.	0.436
CIRBP	HNRNPAB	ENSTGUP00000019619	ENSTGUP00000018830	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein A/B.	0.458
CIRBP	HNRNPDL	ENSTGUP00000019619	ENSTGUP00000028690	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein D like.	0.402
CIRBP	HNRNPH1	ENSTGUP00000019619	ENSTGUP00000028989	RRM domain-containing protein.	Uncharacterized protein.	0.419
CIRBP	HNRNPH3	ENSTGUP00000019619	ENSTGUP00000019977	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein H3.	0.419
CIRBP	HNRNPK	ENSTGUP00000019619	ENSTGUP00000029235	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K.	0.729
CIRBP	HNRNPM	ENSTGUP00000019619	ENSTGUP00000000966	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein M.	0.424
CIRBP	PABPN1L	ENSTGUP00000019619	ENSTGUP00000025622	RRM domain-containing protein.	Uncharacterized protein.	0.575
CIRBP	PTBP1	ENSTGUP00000019619	ENSTGUP00000022739	RRM domain-containing protein.	Polypyrimidine tract binding protein 1.	0.437
CIRBP	PTBP2	ENSTGUP00000019619	ENSTGUP00000027801	RRM domain-containing protein.	Polypyrimidine tract binding protein 2.	0.437
CIRBP	PTBP3	ENSTGUP00000019619	ENSTGUP00000001303	RRM domain-containing protein.	Polypyrimidine tract binding protein 3.	0.437
CIRBP	RBMX	ENSTGUP00000019619	ENSTGUP00000002202	RRM domain-containing protein.	RRM domain-containing protein.	0.443
CIRBP	SRSF1	ENSTGUP00000019619	ENSTGUP00000028385	RRM domain-containing protein.	RRM domain-containing protein.	0.559
CIRBP	SRSF2	ENSTGUP00000019619	ENSTGUP00000022960	RRM domain-containing protein.	RRM domain-containing protein.	0.590
CIRBP	SRSF7	ENSTGUP00000019619	ENSTGUP00000024908	RRM domain-containing protein.	Uncharacterized protein.	0.404
CIRBP	TIAL1	ENSTGUP00000019619	ENSTGUP00000011503	RRM domain-containing protein.	TIA1 cytotoxic granule associated RNA binding protein like 1.	0.411
CIRBP	TRA2A	ENSTGUP00000019619	ENSTGUP00000002880	RRM domain-containing protein.	Transformer 2 alpha homolog.	0.510
CIRBP	TRA2B	ENSTGUP00000019619	ENSTGUP00000025474	RRM domain-containing protein.	RRM domain-containing protein.	0.522