STRINGSTRING
SEMA3C SEMA3C CRB1 CRB1 LOC100230282 LOC100230282 EDNRA EDNRA DBH DBH JAG1 JAG1 FGF8 FGF8 BMPR2 BMPR2 LIF LIF DLL4 DLL4 CHD7 CHD7 RSPO3 RSPO3 BAX BAX LOC115491405 LOC115491405 CHD8 CHD8 EPAS1 EPAS1 ATG5 ATG5 CHD9 CHD9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEMA3CUncharacterized protein; Belongs to the semaphorin family. (751 aa)
CRB1Uncharacterized protein. (1407 aa)
LOC100230282Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (586 aa)
EDNRAEndothelin receptor type A; Belongs to the G-protein coupled receptor 1 family. (421 aa)
DBHDopamine beta-hydroxylase. (643 aa)
JAG1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1216 aa)
FGF8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (214 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1036 aa)
LIFLIF interleukin 6 family cytokine. (211 aa)
DLL4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (683 aa)
CHD7Chromodomain helicase DNA binding protein 7. (3012 aa)
RSPO3R-spondin 3. (275 aa)
BAXBCL2 associated X, apoptosis regulator. (225 aa)
LOC115491405Serine/threonine-protein kinase receptor R3 isoform X2. (493 aa)
CHD8Chromodomain helicase DNA binding protein 8. (1744 aa)
EPAS1Endothelial PAS domain protein 1. (866 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
CHD9Chromodomain helicase DNA binding protein 9. (2890 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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