(11 nodes) Response to muscle activity network (Taeniopygia guttata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PERM1	PPARGC1 and ESRR induced regulator, muscle 1. (935 aa)
	PRKAA2	Non-specific serine/threonine protein kinase. (552 aa)
	SLC7A5	Solute carrier family 7 member 5. (522 aa)
	METRNL	Meteorin like, glial cell differentiation regulator. (292 aa)
	FNDC5	Fibronectin type III domain containing 5. (220 aa)
	ABCG8	ATP binding cassette subfamily G member 8. (678 aa)
	ABCG5	ATP binding cassette subfamily G member 5. (641 aa)
	MYOG	Myogenin. (270 aa)
	PPARGC1A	PPARG coactivator 1 alpha. (807 aa)
	MTFP1	Uncharacterized protein. (174 aa)
	CAPN3	Calpain 3; Belongs to the peptidase C2 family. (809 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCG5	ABCG8	ENSTGUP00000036826	ENSTGUP00000037476	ATP binding cassette subfamily G member 5.	ATP binding cassette subfamily G member 8.	0.998
ABCG8	ABCG5	ENSTGUP00000037476	ENSTGUP00000036826	ATP binding cassette subfamily G member 8.	ATP binding cassette subfamily G member 5.	0.998
FNDC5	PPARGC1A	ENSTGUP00000001380	ENSTGUP00000035013	Fibronectin type III domain containing 5.	PPARG coactivator 1 alpha.	0.422
PERM1	PPARGC1A	ENSTGUP00000025992	ENSTGUP00000035013	PPARGC1 and ESRR induced regulator, muscle 1.	PPARG coactivator 1 alpha.	0.446
PPARGC1A	FNDC5	ENSTGUP00000035013	ENSTGUP00000001380	PPARG coactivator 1 alpha.	Fibronectin type III domain containing 5.	0.422
PPARGC1A	PERM1	ENSTGUP00000035013	ENSTGUP00000025992	PPARG coactivator 1 alpha.	PPARGC1 and ESRR induced regulator, muscle 1.	0.446