STRINGSTRING
VPS11 VPS11 YIPF5 YIPF5 TMEM175 TMEM175 SNAP47 SNAP47 AP3D1 AP3D1 SOX30 SOX30 SNX19 SNX19 STX12 STX12 KLHL12 KLHL12 TMEM9 TMEM9 USO1 USO1 UNC13B UNC13B GOLPH3 GOLPH3 GOSR2 GOSR2 VPS4B VPS4B ZPBP2 ZPBP2 VAMP3 VAMP3 GPNMB GPNMB TRAPPC13 TRAPPC13 CHMP6 CHMP6 PLEKHM1 PLEKHM1 STX1B STX1B STX1A STX1A CHMP4B CHMP4B LOC100217819 LOC100217819 SRGN SRGN ANKFY1 ANKFY1 DNAJC13 DNAJC13 AP3B2 AP3B2 TYRP1 TYRP1 H0Z2X7_TAEGU H0Z2X7_TAEGU LOC105760438 LOC105760438 RILP RILP ABCB6 ABCB6 SNAP25 SNAP25 STX3 STX3 PHETA1 PHETA1 SYT7 SYT7 UNC13C UNC13C TBC1D20 TBC1D20 SRPX SRPX SEC24C SEC24C VPS8 VPS8 USP50 USP50 SEC31B SEC31B HPS4 HPS4 RAB7A RAB7A CUL3 CUL3 CHMP5 CHMP5 YIPF7 YIPF7 GPR143 GPR143 PDCD6 PDCD6 RAB20 RAB20 PAFAH1B1 PAFAH1B1 YIPF4 YIPF4 STX17 STX17 LOC100223778 LOC100223778 PI4K2B PI4K2B PI4K2A PI4K2A HOOK1 HOOK1 TMF1 TMF1 TGFBRAP1 TGFBRAP1 SPG11 SPG11 SEC13 SEC13 RAB32 RAB32 STX11 STX11 VPS39 VPS39 WASHC4 WASHC4 MTRF1L MTRF1L TBPL1 TBPL1 CHMP4C CHMP4C STXBP6 STXBP6 LAPTM4B LAPTM4B VPS13B VPS13B ARFGAP3 ARFGAP3 RUBCNL RUBCNL WASHC5 WASHC5 LOC115493492 LOC115493492 TSNARE1 TSNARE1 RAB38 RAB38 PICALM PICALM AQP11 AQP11 ACRBP ACRBP ENSTGUP00000013733 ENSTGUP00000013733 STX19 STX19 UVRAG UVRAG TFG TFG SQSTM1 SQSTM1 VPS4A VPS4A CHMP7 CHMP7 STX6 STX6 GOLPH3L GOLPH3L SYT11 SYT11 EXOC8 EXOC8 SEC22B SEC22B LOC100227551 LOC100227551 SYT13 SYT13 AKTIP AKTIP SEC24A SEC24A LOC105758760 LOC105758760 SNX10 SNX10 PIKFYVE PIKFYVE ENSTGUP00000020579 ENSTGUP00000020579 LAPTM4A LAPTM4A SEC24D SEC24D ENSTGUP00000021421 ENSTGUP00000021421 CREB1 CREB1 EEA1 EEA1 ENSTGUP00000022270 ENSTGUP00000022270 RAB8A RAB8A STX16 STX16 SNX11 SNX11 LOC115492748 LOC115492748 ENSTGUP00000023319 ENSTGUP00000023319 VTI1B VTI1B PLEKHF2 PLEKHF2 LOC100217898 LOC100217898 HOOK3 HOOK3 BLOC1S4 BLOC1S4 SEC24B SEC24B STX5 STX5 SCAP SCAP TRARG1 TRARG1 ENSTGUP00000025606 ENSTGUP00000025606 H0YPK2_TAEGU H0YPK2_TAEGU VAMP4 VAMP4 GOSR1 GOSR1 SEC16A SEC16A ENSTGUP00000026317 ENSTGUP00000026317 ALS2CL ALS2CL ENSTGUP00000026673 ENSTGUP00000026673 ARFGAP2 ARFGAP2 RNF26 RNF26 PLEKHJ1 PLEKHJ1 SEC16B SEC16B LOC100232098 LOC100232098 BLOC1S3 BLOC1S3 BET1 BET1 LOC100228529 LOC100228529 TMED10 TMED10 GBF1 GBF1 ENSTGUP00000028831 ENSTGUP00000028831 PIP4K2A PIP4K2A DTNBP1 DTNBP1 ENSTGUP00000029288 ENSTGUP00000029288 VPS41 VPS41 AP3B1 AP3B1 VAMP8 VAMP8 SEC23A SEC23A CAV2 CAV2 VTI1A VTI1A VAMP1 VAMP1 LOC100230284 LOC100230284 KNL1 KNL1 LOC115492747 LOC115492747 USP8 USP8 ALS2 ALS2 PLA2G2A PLA2G2A STX8 STX8 RAB15 RAB15 LOC115498434 LOC115498434 LOC115498158 LOC115498158 RAB39A RAB39A LAMTOR1 LAMTOR1 LOC115494071 LOC115494071 ENSTGUP00000032019 ENSTGUP00000032019 VPS18 VPS18 ASIP ASIP PHETA2 PHETA2 STX2 STX2 PEF1 PEF1 SEC31A SEC31A AQP1 AQP1 ENSTGUP00000033728 ENSTGUP00000033728 FNBP1L FNBP1L SAR1B SAR1B SNAPIN SNAPIN SHROOM2 SHROOM2 SEC23B SEC23B SNAP29 SNAP29 ENSTGUP00000035259 ENSTGUP00000035259 SYT4 SYT4 ZNF385A ZNF385A RAB7B RAB7B ENSTGUP00000035758 ENSTGUP00000035758 RAB14 RAB14 PIP4K2B PIP4K2B ENSTGUP00000035970 ENSTGUP00000035970 STX5-2 STX5-2 ENSTGUP00000036438 ENSTGUP00000036438 ENSTGUP00000036454 ENSTGUP00000036454 RAB22A RAB22A AGFG1 AGFG1 LOC105759519 LOC105759519 ARFGEF2 ARFGEF2 SNAP23 SNAP23 SNAP91 SNAP91
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VPS11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (968 aa)
YIPF5Protein YIPF. (254 aa)
TMEM175Uncharacterized protein. (496 aa)
SNAP47Synaptosome associated protein 47. (506 aa)
AP3D1Adaptor related protein complex 3 subunit delta 1. (1152 aa)
SOX30SRY-box transcription factor 30. (753 aa)
SNX19Sorting nexin 19. (943 aa)
STX12Syntaxin 12; Belongs to the syntaxin family. (271 aa)
KLHL12BTB domain-containing protein. (660 aa)
TMEM9Transmembrane protein 9. (264 aa)
USO1USO1 vesicle transport factor. (912 aa)
UNC13BUnc-13 homolog B. (1625 aa)
GOLPH3Golgi phosphoprotein 3. (313 aa)
GOSR2Uncharacterized protein. (370 aa)
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (441 aa)
ZPBP2Zona pellucida binding protein 2. (343 aa)
VAMP3V-SNARE coiled-coil homology domain-containing protein. (393 aa)
GPNMBPKD domain-containing protein. (560 aa)
TRAPPC13Trafficking protein particle complex 13. (417 aa)
CHMP6Charged multivesicular body protein 6. (200 aa)
PLEKHM1Uncharacterized protein. (1031 aa)
STX1BSyntaxin-1B isoform X1. (288 aa)
STX1At-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (313 aa)
CHMP4BCharged multivesicular body protein 4B. (227 aa)
LOC100217819Melanocyte protein PMEL. (650 aa)
SRGNUncharacterized protein. (140 aa)
ANKFY1Ankyrin repeat and FYVE domain containing 1. (1167 aa)
DNAJC13DnaJ heat shock protein family (Hsp40) member C13. (2245 aa)
AP3B2AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1102 aa)
TYRP1Tyrosinase related protein 1. (536 aa)
H0Z2X7_TAEGUUncharacterized protein. (1484 aa)
LOC105760438Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
RILPRab interacting lysosomal protein. (342 aa)
ABCB6ATP binding cassette subfamily B member 6 (Langereis blood group). (840 aa)
SNAP25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (211 aa)
STX3Syntaxin 3. (331 aa)
PHETA1PH domain containing endocytic trafficking adaptor 1. (255 aa)
SYT7Synaptotagmin 7. (684 aa)
UNC13CUnc-13 homolog C. (2206 aa)
TBC1D20TBC1 domain family member 20. (400 aa)
SRPXUncharacterized protein. (494 aa)
SEC24CUncharacterized protein. (1173 aa)
VPS8VPS8 subunit of CORVET complex. (1393 aa)
USP50USP domain-containing protein; Belongs to the peptidase C19 family. (340 aa)
SEC31BSEC31 homolog B, COPII coat complex component. (1180 aa)
HPS4Uncharacterized protein. (659 aa)
RAB7ARAB7A, member RAS oncogene family. (209 aa)
CUL3Cullin 3; Belongs to the cullin family. (768 aa)
CHMP5Putative SNF7 domain containing 2 variant 1. (219 aa)
YIPF7Protein YIPF. (257 aa)
GPR143G protein-coupled receptor 143. (392 aa)
PDCD6Programmed cell death 6. (121 aa)
RAB20RAB20, member RAS oncogene family. (235 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (407 aa)
YIPF4Protein YIPF. (279 aa)
STX17Syntaxin 17; Belongs to the syntaxin family. (301 aa)
LOC100223778Pleckstrin homology domain-containing family F member 1-like. (216 aa)
PI4K2BPhosphatidylinositol 4-kinase type 2 beta. (485 aa)
PI4K2API3K/PI4K domain-containing protein. (523 aa)
HOOK1Calponin-homology (CH) domain-containing protein. (713 aa)
TMF1TATA element modulatory factor 1. (1103 aa)
TGFBRAP1CNH domain-containing protein. (863 aa)
SPG11SPG11 vesicle trafficking associated, spatacsin. (2370 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
RAB32RAB32, member RAS oncogene family. (218 aa)
STX11Syntaxin 11. (288 aa)
VPS39VPS39 subunit of HOPS complex. (789 aa)
WASHC4WASH complex subunit 4. (1172 aa)
MTRF1LF-box protein 5. (592 aa)
TBPL1TATA-box binding protein like 1. (183 aa)
CHMP4CCharged multivesicular body protein 4C. (220 aa)
STXBP6Syntaxin binding protein 6. (210 aa)
LAPTM4BLysosomal protein transmembrane 4 beta. (250 aa)
VPS13BVacuolar protein sorting 13 homolog B. (4030 aa)
ARFGAP3ADP ribosylation factor GTPase activating protein 3. (536 aa)
RUBCNLRubicon like autophagy enhancer. (762 aa)
WASHC5Uncharacterized protein. (1159 aa)
LOC115493492Uncharacterized protein. (268 aa)
TSNARE1t-SNARE domain containing 1. (293 aa)
RAB38RAB38, member RAS oncogene family. (294 aa)
PICALMPhosphatidylinositol binding clathrin assembly protein. (686 aa)
AQP11Aquaporin 11. (273 aa)
ACRBPUncharacterized protein. (477 aa)
ENSTGUP00000013733annotation not available (113 aa)
STX19Syntaxin 19; Belongs to the syntaxin family. (292 aa)
UVRAGUV radiation resistance associated. (687 aa)
TFGTrafficking from ER to golgi regulator. (378 aa)
SQSTM1Uncharacterized protein. (453 aa)
VPS4AAAA domain-containing protein. (446 aa)
CHMP7Charged multivesicular body protein 7. (473 aa)
STX6Syntaxin 6; Belongs to the syntaxin family. (359 aa)
GOLPH3LUncharacterized protein. (284 aa)
SYT11Synaptotagmin 11. (484 aa)
EXOC8Exocyst complex component 8. (710 aa)
SEC22BSEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (215 aa)
LOC100227551Uncharacterized protein. (186 aa)
SYT13Synaptotagmin 13. (431 aa)
AKTIPAKT interacting protein. (335 aa)
SEC24AUncharacterized protein. (1082 aa)
LOC105758760Uncharacterized protein. (1184 aa)
SNX10Sorting nexin 10. (201 aa)
PIKFYVEPhosphoinositide kinase, FYVE-type zinc finger containing. (2006 aa)
ENSTGUP00000020579annotation not available (505 aa)
LAPTM4AUncharacterized protein. (213 aa)
SEC24DSEC24 homolog D, COPII coat complex component. (1093 aa)
ENSTGUP00000021421annotation not available (1349 aa)
CREB1cAMP responsive element binding protein 1. (324 aa)
EEA1Early endosome antigen 1. (1410 aa)
ENSTGUP00000022270annotation not available (371 aa)
RAB8ARAB8A, member RAS oncogene family. (263 aa)
STX16t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (326 aa)
SNX11Sorting nexin 11. (500 aa)
LOC115492748Ribonuclease kappa. (98 aa)
ENSTGUP00000023319annotation not available (371 aa)
VTI1BVesicle transport through interaction with t-SNAREs 1B. (232 aa)
PLEKHF2Pleckstrin homology and FYVE domain containing 2. (249 aa)
LOC100217898Vesicle-associated membrane protein 7. (278 aa)
HOOK3Hook microtubule tethering protein 3. (731 aa)
BLOC1S4Biogenesis of lysosomal organelles complex 1 subunit 4. (205 aa)
SEC24BSEC24 homolog B, COPII coat complex component. (1232 aa)
STX5Syntaxin 5. (581 aa)
SCAPSterol regulatory element-binding protein cleavage-activating protein isoform X1. (1283 aa)
TRARG1Trafficking regulator of GLUT4 1. (176 aa)
ENSTGUP00000025606annotation not available (397 aa)
H0YPK2_TAEGUUncharacterized protein. (1716 aa)
VAMP4Vesicle associated membrane protein 4. (64 aa)
GOSR1Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (248 aa)
SEC16AProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2421 aa)
ENSTGUP00000026317annotation not available (494 aa)
ALS2CLALS2 C-terminal like. (1006 aa)
ENSTGUP00000026673annotation not available (673 aa)
ARFGAP2ADP ribosylation factor GTPase activating protein 2. (641 aa)
RNF26RING-type domain-containing protein. (460 aa)
PLEKHJ1Pleckstrin homology domain containing J1. (412 aa)
SEC16BProtein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (1085 aa)
LOC100232098V-SNARE coiled-coil homology domain-containing protein. (121 aa)
BLOC1S3Uncharacterized protein. (264 aa)
BET1t-SNARE coiled-coil homology domain-containing protein. (115 aa)
LOC100228529Pleckstrin homology and FYVE domain containing 1. (281 aa)
TMED10Transmembrane p24 trafficking protein 10. (223 aa)
GBF1Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (1965 aa)
ENSTGUP00000028831annotation not available (350 aa)
PIP4K2APhosphatidylinositol-5-phosphate 4-kinase type 2 alpha. (427 aa)
DTNBP1Dystrobrevin binding protein 1. (351 aa)
ENSTGUP00000029288Syntaxin-1B-like. (211 aa)
VPS41Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (894 aa)
AP3B1AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1137 aa)
VAMP8Vesicle-associated membrane protein 8. (75 aa)
SEC23AProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
CAV2Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (163 aa)
VTI1AVesicle transport through interaction with t-SNAREs 1A. (224 aa)
VAMP1Vesicle associated membrane protein 1. (134 aa)
LOC100230284ENTH domain-containing protein. (683 aa)
KNL1Uncharacterized protein. (2073 aa)
LOC115492747Ribonuclease kappa. (234 aa)
USP8Uncharacterized protein; Belongs to the peptidase C19 family. (1115 aa)
ALS2Alsin Rho guanine nucleotide exchange factor ALS2. (1649 aa)
PLA2G2APhospholipase A2 group IIA. (132 aa)
STX8Syntaxin 8. (275 aa)
RAB15Ras-related protein Rab-15 isoform X1. (211 aa)
LOC115498434Protein S100-A10 isoform X2. (279 aa)
LOC115498158Transmembrane protein 127. (237 aa)
RAB39ARas-related protein Rab-39A. (249 aa)
LAMTOR1Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. (244 aa)
LOC115494071Uncharacterized protein LOC115494071. (590 aa)
ENSTGUP00000032019annotation not available (379 aa)
VPS18VPS18 core subunit of CORVET and HOPS complexes. (906 aa)
ASIPAgouti signaling protein. (179 aa)
PHETA2Sesquipedalian-2. (270 aa)
STX2Syntaxin 2; Belongs to the syntaxin family. (593 aa)
PEF1Penta-EF-hand domain containing 1. (240 aa)
SEC31ASEC31 homolog A, COPII coat complex component. (1279 aa)
AQP1Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
ENSTGUP00000033728annotation not available (85 aa)
FNBP1LFormin binding protein 1 like. (605 aa)
SAR1BSecretion associated Ras related GTPase 1A; Belongs to the small GTPase superfamily. SAR1 family. (197 aa)
SNAPINSNARE-associated protein Snapin. (120 aa)
SHROOM2Shroom family member 2. (1753 aa)
SEC23BProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (823 aa)
SNAP29t-SNARE coiled-coil homology domain-containing protein. (249 aa)
ENSTGUP00000035259annotation not available (270 aa)
SYT4Uncharacterized protein. (571 aa)
ZNF385AZinc finger protein 385A. (327 aa)
RAB7BRAB7B, member RAS oncogene family. (254 aa)
ENSTGUP00000035758annotation not available (397 aa)
RAB14Uncharacterized protein. (268 aa)
PIP4K2BPhosphatidylinositol 5-phosphate 4-kinase type-2 beta. (528 aa)
ENSTGUP00000035970annotation not available (443 aa)
STX5-2Syntaxin 5. (56 aa)
ENSTGUP00000036438annotation not available (154 aa)
ENSTGUP00000036454annotation not available (693 aa)
RAB22ARAB22A, member RAS oncogene family. (253 aa)
AGFG1ArfGAP with FG repeats 1. (603 aa)
LOC105759519Uncharacterized LOC105759519. (374 aa)
ARFGEF2ADP ribosylation factor guanine nucleotide exchange factor 2. (1920 aa)
SNAP23Synaptosomal-associated protein; Belongs to the SNAP-25 family. (219 aa)
SNAP91Synaptosome associated protein 91. (892 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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