(12 nodes) Viral release from host cell network (Taeniopygia guttata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VPS4A	AAA domain-containing protein. (446 aa)
	LOC115492027	Pyruvate carboxylase, mitochondrial-like. (1176 aa)
	LOC100223835	E3 ubiquitin-protein ligase TRIM62. (473 aa)
	VPS37B	VPS37 C-terminal domain-containing protein. (287 aa)
	CAV2	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (163 aa)
	LOC100190340	Uncharacterized protein. (261 aa)
	LOC115497975	Tripartite motif containing 62. (475 aa)
	CHMP5	Putative SNF7 domain containing 2 variant 1. (219 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (441 aa)
	IST1	IST1 factor associated with ESCRT-III. (365 aa)
	TSG101	Tumor susceptibility 101. (377 aa)
	LOC115491983	Pyruvate carboxylase, mitochondrial. (1176 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHMP5	IST1	ENSTGUP00000008472	ENSTGUP00000008520	Putative SNF7 domain containing 2 variant 1.	IST1 factor associated with ESCRT-III.	0.956
CHMP5	LOC100190340	ENSTGUP00000008472	ENSTGUP00000034186	Putative SNF7 domain containing 2 variant 1.	Uncharacterized protein.	0.954
CHMP5	TSG101	ENSTGUP00000008472	ENSTGUP00000009204	Putative SNF7 domain containing 2 variant 1.	Tumor susceptibility 101.	0.639
CHMP5	VPS37B	ENSTGUP00000008472	ENSTGUP00000021223	Putative SNF7 domain containing 2 variant 1.	VPS37 C-terminal domain-containing protein.	0.606
CHMP5	VPS4A	ENSTGUP00000008472	ENSTGUP00000014855	Putative SNF7 domain containing 2 variant 1.	AAA domain-containing protein.	0.985
CHMP5	VPS4B	ENSTGUP00000008472	ENSTGUP00000002118	Putative SNF7 domain containing 2 variant 1.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.985
IST1	CHMP5	ENSTGUP00000008520	ENSTGUP00000008472	IST1 factor associated with ESCRT-III.	Putative SNF7 domain containing 2 variant 1.	0.956
IST1	LOC100190340	ENSTGUP00000008520	ENSTGUP00000034186	IST1 factor associated with ESCRT-III.	Uncharacterized protein.	0.955
IST1	TSG101	ENSTGUP00000008520	ENSTGUP00000009204	IST1 factor associated with ESCRT-III.	Tumor susceptibility 101.	0.579
IST1	VPS37B	ENSTGUP00000008520	ENSTGUP00000021223	IST1 factor associated with ESCRT-III.	VPS37 C-terminal domain-containing protein.	0.408
IST1	VPS4A	ENSTGUP00000008520	ENSTGUP00000014855	IST1 factor associated with ESCRT-III.	AAA domain-containing protein.	0.956
IST1	VPS4B	ENSTGUP00000008520	ENSTGUP00000002118	IST1 factor associated with ESCRT-III.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.956
LOC100190340	CHMP5	ENSTGUP00000034186	ENSTGUP00000008472	Uncharacterized protein.	Putative SNF7 domain containing 2 variant 1.	0.954
LOC100190340	IST1	ENSTGUP00000034186	ENSTGUP00000008520	Uncharacterized protein.	IST1 factor associated with ESCRT-III.	0.955
LOC100190340	TSG101	ENSTGUP00000034186	ENSTGUP00000009204	Uncharacterized protein.	Tumor susceptibility 101.	0.874
LOC100190340	VPS37B	ENSTGUP00000034186	ENSTGUP00000021223	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.870
LOC100190340	VPS4A	ENSTGUP00000034186	ENSTGUP00000014855	Uncharacterized protein.	AAA domain-containing protein.	0.898
LOC100190340	VPS4B	ENSTGUP00000034186	ENSTGUP00000002118	Uncharacterized protein.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.898
TSG101	CHMP5	ENSTGUP00000009204	ENSTGUP00000008472	Tumor susceptibility 101.	Putative SNF7 domain containing 2 variant 1.	0.639
TSG101	IST1	ENSTGUP00000009204	ENSTGUP00000008520	Tumor susceptibility 101.	IST1 factor associated with ESCRT-III.	0.579