STRINGSTRING
CIB1 CIB1 PODXL PODXL SKAP1 SKAP1 LIF LIF RET RET LRRC45 LRRC45 ITGB3 ITGB3 SYK SYK PTPN6 PTPN6 TGFB2 TGFB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CIB1Calcium and integrin binding 1. (213 aa)
PODXLUncharacterized protein. (602 aa)
SKAP1PH domain-containing protein. (361 aa)
LIFLIF interleukin 6 family cytokine. (211 aa)
RETProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1104 aa)
LRRC45Leucine rich repeat containing 45. (750 aa)
ITGB3Integrin beta; Belongs to the integrin beta chain family. (797 aa)
SYKTyrosine-protein kinase. (668 aa)
PTPN6Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (840 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (433 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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