STRINGSTRING
PTF1A PTF1A EDA EDA SOX9 SOX9 DAG1 DAG1 RAB26 RAB26 EDAR EDAR FGF8 FGF8 LOC100225657 LOC100225657 PDX1 PDX1 SRP54 SRP54 LOC115493455 LOC115493455 H0ZTH0_TAEGU H0ZTH0_TAEGU FGF7 FGF7 SEMA3C SEMA3C LOC100225657-2 LOC100225657-2 ENSTGUP00000026483 ENSTGUP00000026483 PLXND1 PLXND1 TGFB3 TGFB3 TGFB2 TGFB2 ESRP2 ESRP2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTF1APancreas associated transcription factor 1a. (274 aa)
EDAEctodysplasin A; Belongs to the tumor necrosis factor family. (239 aa)
SOX9SRY-box transcription factor 9. (474 aa)
DAG1Dystroglycan 1. (896 aa)
RAB26RAB26, member RAS oncogene family. (263 aa)
EDAREctodysplasin A receptor. (463 aa)
FGF8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (214 aa)
LOC100225657Wnt ligand secretion mediator. (541 aa)
PDX1Homeobox domain-containing protein. (260 aa)
SRP54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (477 aa)
LOC115493455a_DG1_N2 domain-containing protein. (579 aa)
H0ZTH0_TAEGUUncharacterized protein. (959 aa)
FGF7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (194 aa)
SEMA3CUncharacterized protein; Belongs to the semaphorin family. (751 aa)
LOC100225657-2Protein wntless homolog. (541 aa)
ENSTGUP00000026483annotation not available (118 aa)
PLXND1Plexin D1. (1929 aa)
TGFB3Transforming growth factor beta; Belongs to the TGF-beta family. (533 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (433 aa)
ESRP2Epithelial splicing regulatory protein 2. (727 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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