61 items (Taeniopygia guttata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	INPP5B	Rho-GAP domain-containing protein. (866 aa)
	LOC100220402	Ras-related protein Rab-10. (200 aa)
	RAB39A	Ras-related protein Rab-39A. (249 aa)
	STX8	Syntaxin 8. (275 aa)
	PLA2G2A	Phospholipase A2 group IIA. (132 aa)
	VAMP8	Vesicle-associated membrane protein 8. (75 aa)
	H0ZW92_TAEGU	Uncharacterized protein. (185 aa)
	LOC115494778	Treacle protein-like. (779 aa)
	LOC115491394	Natural resistance-associated macrophage protein 2. (639 aa)
	PIP4P1	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1. (347 aa)
	NOD1	Nucleotide binding oligomerization domain containing 1. (951 aa)
	STXBP4	Syntaxin binding protein 4. (723 aa)
	RAB9A	RAB9A, member RAS oncogene family. (201 aa)
	VPS26B	VPS26, retromer complex component B. (450 aa)
	PIK3C3	Phosphatidylinositol 3-kinase catalytic subunit type 3. (916 aa)
	LOC100217898	Vesicle-associated membrane protein 7. (278 aa)
	LOC100231622	Ovalbumin. (386 aa)
	RAB23	RAB23, member RAS oncogene family. (237 aa)
	RAB11FIP1	FIP-RBD domain-containing protein. (1362 aa)
	RAB31	RAB31, member RAS oncogene family. (346 aa)
	SLC11A1	Solute carrier family 11 member 1. (633 aa)
	ENSTGUP00000021025	annotation not available (174 aa)
	ENSTGUP00000033523	annotation not available (393 aa)
	ENSTGUP00000033728	annotation not available (85 aa)
	RAB7B	RAB7B, member RAS oncogene family. (254 aa)
	RAB14	Uncharacterized protein. (268 aa)
	CDC42	Cell division cycle 42. (302 aa)
	RAB22A	RAB22A, member RAS oncogene family. (253 aa)
	CDC42EP4	CDC42 effector protein 4. (317 aa)
	ENSTGUP00000033254	annotation not available (279 aa)
	RAB11B	Uncharacterized protein. (267 aa)
	TRIM14	Tripartite motif containing 14. (508 aa)
	SYK	Tyrosine-protein kinase. (668 aa)
	MTOR	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (1322 aa)
	VAMP3	V-SNARE coiled-coil homology domain-containing protein. (393 aa)
	LOC100231666	Uncharacterized protein. (216 aa)
	OCRL	OCRL inositol polyphosphate-5-phosphatase. (1295 aa)
	LOC105760438	Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)
	RILP	Rab interacting lysosomal protein. (342 aa)
	ANXA11	Annexin. (522 aa)
	SYT7	Synaptotagmin 7. (684 aa)
	APPL1	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. (708 aa)
	LOC100220068	TIR domain-containing protein. (874 aa)
	RAB7A	RAB7A, member RAS oncogene family. (209 aa)
	RAB20	RAB20, member RAS oncogene family. (235 aa)
	LAMP1	Lysosomal associated membrane protein 1. (415 aa)
	RAB11A	RAB11A, member RAS oncogene family. (216 aa)
	RAB32	RAB32, member RAS oncogene family. (218 aa)
	APPL2	Uncharacterized protein. (658 aa)
	PIP4P2	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (257 aa)
	RAB38	RAB38, member RAS oncogene family. (294 aa)
	ATG14	Uncharacterized protein. (491 aa)
	UVRAG	UV radiation resistance associated. (687 aa)
	PIKFYVE	Phosphoinositide kinase, FYVE-type zinc finger containing. (2006 aa)
	STXBP3	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (594 aa)
	AMBRA1	Autophagy and beclin 1 regulator 1. (1299 aa)
	ENSTGUP00000019362	annotation not available (666 aa)
	H0ZYT8_TAEGU	Uncharacterized protein. (1509 aa)
	SYT11	Synaptotagmin 11. (484 aa)
	STX6	Syntaxin 6; Belongs to the syntaxin family. (359 aa)
	ENSTGUP00000015546	annotation not available (204 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMBRA1	ATG14	ENSTGUP00000019891	ENSTGUP00000013460	Autophagy and beclin 1 regulator 1.	Uncharacterized protein.	0.805
AMBRA1	PIK3C3	ENSTGUP00000019891	ENSTGUP00000025064	Autophagy and beclin 1 regulator 1.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.860
AMBRA1	UVRAG	ENSTGUP00000019891	ENSTGUP00000013964	Autophagy and beclin 1 regulator 1.	UV radiation resistance associated.	0.666
APPL1	APPL2	ENSTGUP00000007428	ENSTGUP00000011422	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Uncharacterized protein.	0.999
APPL1	INPP5B	ENSTGUP00000007428	ENSTGUP00000015152	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Rho-GAP domain-containing protein.	0.572
APPL1	LOC100231666	ENSTGUP00000007428	ENSTGUP00000003794	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Uncharacterized protein.	0.542
APPL1	OCRL	ENSTGUP00000007428	ENSTGUP00000005200	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	OCRL inositol polyphosphate-5-phosphatase.	0.646
APPL1	RAB11A	ENSTGUP00000007428	ENSTGUP00000009574	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB11A, member RAS oncogene family.	0.542
APPL1	RAB11B	ENSTGUP00000007428	ENSTGUP00000000085	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	Uncharacterized protein.	0.542
APPL1	RAB20	ENSTGUP00000007428	ENSTGUP00000009057	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB20, member RAS oncogene family.	0.852
APPL1	RAB22A	ENSTGUP00000007428	ENSTGUP00000037081	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB22A, member RAS oncogene family.	0.852
APPL1	RAB31	ENSTGUP00000007428	ENSTGUP00000023576	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	RAB31, member RAS oncogene family.	0.852
APPL2	APPL1	ENSTGUP00000011422	ENSTGUP00000007428	Uncharacterized protein.	Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.	0.999
APPL2	LOC100231666	ENSTGUP00000011422	ENSTGUP00000003794	Uncharacterized protein.	Uncharacterized protein.	0.542
APPL2	RAB11A	ENSTGUP00000011422	ENSTGUP00000009574	Uncharacterized protein.	RAB11A, member RAS oncogene family.	0.542
APPL2	RAB11B	ENSTGUP00000011422	ENSTGUP00000000085	Uncharacterized protein.	Uncharacterized protein.	0.542
APPL2	RAB20	ENSTGUP00000011422	ENSTGUP00000009057	Uncharacterized protein.	RAB20, member RAS oncogene family.	0.852
APPL2	RAB22A	ENSTGUP00000011422	ENSTGUP00000037081	Uncharacterized protein.	RAB22A, member RAS oncogene family.	0.852
APPL2	RAB31	ENSTGUP00000011422	ENSTGUP00000023576	Uncharacterized protein.	RAB31, member RAS oncogene family.	0.852
ATG14	AMBRA1	ENSTGUP00000013460	ENSTGUP00000019891	Uncharacterized protein.	Autophagy and beclin 1 regulator 1.	0.805