STRINGSTRING
MFAP5 MFAP5 PTPRQ PTPRQ ARL13B ARL13B USH1G USH1G NKX3-2 NKX3-2 CCDC103 CCDC103 KDM6A KDM6A SCRIB SCRIB AHI1 AHI1 PITX2 PITX2 IFT52 IFT52 CER1 CER1 SRF SRF CTNNB1 CTNNB1 WNT2 WNT2 NTN1 NTN1 EDN1 EDN1 LRIG3 LRIG3 TGFBR1 TGFBR1 PAX2 PAX2 TBX2 TBX2 PCK1 PCK1 SP3 SP3 ZIC1 ZIC1 HOXD10 HOXD10 HOXD9 HOXD9 HOXD4 HOXD4 TH TH LRIG1 LRIG1 DLL1 DLL1 OTOP1 OTOP1 MSX1 MSX1 FGF8 FGF8 SUFU SUFU LOC100225628 LOC100225628 MIB1 MIB1 TTC39C TTC39C VAX1 VAX1 CHD7 CHD7 LOC100217613 LOC100217613 FRZB FRZB CLRN1 CLRN1 RDH10 RDH10 OSR2 OSR2 SOBP SOBP TSHR TSHR TBX18 TBX18 MYO6 MYO6 FZD3 FZD3 WNT11 WNT11 LOC100230015 LOC100230015 LOC115490578 LOC115490578 IFT172 IFT172 VAX2 VAX2 WNT2B WNT2B MYF5 MYF5 WNT3A WNT3A HOXA5 HOXA5 HOXA9 HOXA9 HOXA11 HOXA11 PROX1 PROX1 CCDC40 CCDC40 WHRN WHRN HOXB5 HOXB5 HOXB6 HOXB6 HOXB9 HOXB9 ENG ENG TGFBR2 TGFBR2 SIX2 SIX2 LOC100224677 LOC100224677 STRA6 STRA6 HOXA4 HOXA4 SOX9 SOX9 HLX HLX LOC100226560 LOC100226560 NAGLU NAGLU EDNRA EDNRA WDPCP WDPCP PKD2 PKD2 EIF4A3 EIF4A3 GATA3 GATA3 FOXF2 FOXF2 EPHA2 EPHA2 WNT9B WNT9B SMO SMO DLX5 DLX5 DLX6 DLX6 MYO3A MYO3A PHACTR4 PHACTR4 ALX3 ALX3 CITED4 CITED4 WDR60 WDR60 SHH SHH GAS1 GAS1 TMIE TMIE SETD2 SETD2 LHX5 LHX5 MFAP2 MFAP2 HOXD3 HOXD3 IHH IHH POPDC2 POPDC2 IFT140 IFT140 GSC GSC ALDH1A3 ALDH1A3 LHX1 LHX1 LOC100224466 LOC100224466 FRS2 FRS2 PDZD7 PDZD7 TBX20 TBX20 HOXC4 HOXC4 GBX2 GBX2 SIX1 SIX1 RBPMS2 RBPMS2 CLRN2 CLRN2 MICAL2 MICAL2 TMED2 TMED2 SLC39A3 SLC39A3 BLOC1S5 BLOC1S5 LRRC1 LRRC1 TCF21 TCF21 LOC100217872 LOC100217872 NBL1 NBL1 EYA1 EYA1 CHD9 CHD9 ENSTGUP00000032218 ENSTGUP00000032218 TBX3 TBX3 HAND1 HAND1 FBN1 FBN1 USH1C USH1C PDGFRA PDGFRA TBX15 TBX15 SLITRK6 SLITRK6 NKX2-5 NKX2-5 ASB2 ASB2 CRB2 CRB2 TPRN TPRN DNAAF1 DNAAF1 HOXB4 HOXB4 CLUAP1 CLUAP1 ENSTGUP00000028036 ENSTGUP00000028036 CTHRC1 CTHRC1 CHST11 CHST11 PSEN1 PSEN1 GRXCR2 GRXCR2 ACVR1 ACVR1 IGF1 IGF1 H0ZR32_TAEGU H0ZR32_TAEGU MYO3B MYO3B CHD8 CHD8 SLC39A1 SLC39A1 OTX1 OTX1 KCNQ1 KCNQ1 SETDB2 SETDB2 SIX4 SIX4 SEC24B SEC24B FOXG1 FOXG1 ENSTGUP00000024970 ENSTGUP00000024970 STIL STIL BMP4 BMP4 EFNA1 EFNA1 LOC100230015-2 LOC100230015-2 ENSTGUP00000024315 ENSTGUP00000024315 NEUROD1 NEUROD1 PAX5 PAX5 DLX2 DLX2 NIPBL NIPBL ENSTGUP00000023855 ENSTGUP00000023855 TCAP TCAP REST REST ENSTGUP00000023326 ENSTGUP00000023326 IFT57 IFT57 WDR19 WDR19 PRRX1 PRRX1 OSR1 OSR1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MFAP5Uncharacterized protein. (238 aa)
PTPRQProtein tyrosine phosphatase receptor type Q. (2358 aa)
ARL13BADP ribosylation factor like GTPase 13B. (396 aa)
USH1GUSH1 protein network component sans. (469 aa)
NKX3-2Homeobox protein Nkx-3.2. (291 aa)
CCDC103Dynein_attach_N domain-containing protein. (556 aa)
KDM6AUncharacterized protein. (1506 aa)
SCRIBScribble planar cell polarity protein. (1623 aa)
AHI1Abelson helper integration site 1. (1244 aa)
PITX2Homeobox protein. (360 aa)
IFT52Uncharacterized protein. (503 aa)
CER1Cerberus 1, DAN family BMP antagonist. (273 aa)
SRFSerum response factor. (485 aa)
CTNNB1Catenin beta 1. (781 aa)
WNT2Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (358 aa)
NTN1Netrin 1. (606 aa)
EDN1Endothelin 1. (202 aa)
LRIG3Leucine rich repeats and immunoglobulin like domains 3. (1104 aa)
TGFBR1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (501 aa)
PAX2Paired box 2. (408 aa)
TBX2TBX domain-containing protein. (653 aa)
PCK1Phosphoenolpyruvate carboxykinase 1. (622 aa)
SP3Sp3 transcription factor. (773 aa)
ZIC1Zic family member 1. (445 aa)
HOXD10Homeobox D10. (339 aa)
HOXD9Homeobox D9. (306 aa)
HOXD4Homeobox D4. (237 aa)
THTyrosine hydroxylase. (491 aa)
LRIG1Leucine rich repeats and immunoglobulin like domains 1. (1213 aa)
DLL1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (727 aa)
OTOP1Otopetrin 1. (576 aa)
MSX1Msh homeobox 1. (291 aa)
FGF8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (214 aa)
SUFUSuppressor of fused homolog. (482 aa)
LOC100225628Uncharacterized protein. (452 aa)
MIB1Mindbomb E3 ubiquitin protein ligase 1. (1006 aa)
TTC39CTetratricopeptide repeat domain 39C. (572 aa)
VAX1Ventral anterior homeobox 1. (320 aa)
CHD7Chromodomain helicase DNA binding protein 7. (3012 aa)
LOC100217613BH4_AAA_HYDROXYL_2 domain-containing protein. (459 aa)
FRZBFrizzled related protein. (379 aa)
CLRN1Clarin 1. (232 aa)
RDH10Uncharacterized protein. (343 aa)
OSR2Odd-skipped related transciption factor 2. (311 aa)
SOBPSine oculis binding protein homolog. (895 aa)
TSHRThyrotropin receptor; Receptor for the thyroid-stimulating hormone (TSH) or thyrotropin. Also acts as a receptor for the heterodimeric glycoprotein hormone (GPHA2:GPHB5) or thyrostimulin. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Plays a central role in controlling thyroid cell metabolism. Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily. (766 aa)
TBX18T-box transcription factor 18. (741 aa)
MYO6Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1285 aa)
FZD3Frizzled domain-containing protein. (696 aa)
WNT11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (369 aa)
LOC100230015Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (258 aa)
LOC115490578Homeobox C10. (318 aa)
IFT172Uncharacterized protein. (1748 aa)
VAX2Homeobox domain-containing protein. (289 aa)
WNT2BProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (385 aa)
MYF5Myogenic factor. (298 aa)
WNT3AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
HOXA5Homeobox A5. (270 aa)
HOXA9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (261 aa)
HOXA11Homeobox A11. (298 aa)
PROX1Prospero homeobox 1. (738 aa)
CCDC40Coiled-coil domain containing 40. (951 aa)
WHRNWhirlin. (1025 aa)
HOXB5Homeobox B5. (265 aa)
HOXB6Homeobox B6. (225 aa)
HOXB9Homeobox B9. (207 aa)
ENGEndoglin. (631 aa)
TGFBR2TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (568 aa)
SIX2SIX homeobox 2. (287 aa)
LOC100224677TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (559 aa)
STRA6Uncharacterized protein. (560 aa)
HOXA4Homeobox A4. (306 aa)
SOX9SRY-box transcription factor 9. (474 aa)
HLXH2.0 like homeobox. (425 aa)
LOC100226560Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (289 aa)
NAGLUN-acetyl-alpha-glucosaminidase. (758 aa)
EDNRAEndothelin receptor type A; Belongs to the G-protein coupled receptor 1 family. (421 aa)
WDPCPWD repeat containing planar cell polarity effector. (718 aa)
PKD2Uncharacterized protein. (903 aa)
EIF4A3Eukaryotic initiation factor 4A-III; ATP-dependent RNA helicase. Involved in pre-mRNA splicing as component of the spliceosome. Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the [...] (410 aa)
GATA3GATA binding protein 3. (443 aa)
FOXF2Forkhead box F2. (405 aa)
EPHA2EPH receptor A2; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1004 aa)
WNT9BProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (313 aa)
SMOSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (778 aa)
DLX5Distal-less homeobox 5. (290 aa)
DLX6Distal-less homeobox 6. (268 aa)
MYO3AMyosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1649 aa)
PHACTR4Phosphatase and actin regulator. (712 aa)
ALX3Homeobox domain-containing protein. (280 aa)
CITED4Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4. (204 aa)
WDR60Uncharacterized protein. (1024 aa)
SHHHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (425 aa)
GAS1Uncharacterized protein. (159 aa)
TMIEUncharacterized protein. (179 aa)
SETD2SET domain containing 2, histone lysine methyltransferase. (2573 aa)
LHX5LIM homeobox 5. (420 aa)
MFAP2Microfibril associated protein 2. (166 aa)
HOXD3Homeobox D3. (415 aa)
IHHIndian hedgehog signaling molecule. (408 aa)
POPDC2Popeye domain containing 2. (370 aa)
IFT140Intraflagellar transport 140. (1476 aa)
GSCGoosecoid homeobox. (441 aa)
ALDH1A3Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (516 aa)
LHX1LIM homeobox 1. (406 aa)
LOC100224466Microfibril associated protein 2. (202 aa)
FRS2Fibroblast growth factor receptor substrate 2. (529 aa)
PDZD7Uncharacterized protein. (1020 aa)
TBX20T-box transcription factor 20. (440 aa)
HOXC4Homeobox C4. (180 aa)
GBX2Homeobox protein GBX-2. (344 aa)
SIX1Homeobox protein SIX1. (282 aa)
RBPMS2RNA binding protein, mRNA processing factor 2. (238 aa)
CLRN2Clarin 2. (232 aa)
MICAL2Microtubule associated monooxygenase, calponin and LIM domain containing 2. (1937 aa)
TMED2Transmembrane p24 trafficking protein 2. (331 aa)
SLC39A3Solute carrier family 39 member 3. (313 aa)
BLOC1S5GST C-terminal domain-containing protein. (307 aa)
LRRC1Leucine rich repeat containing 1. (795 aa)
TCF21Transcription factor 21. (179 aa)
LOC100217872Homeobox protein Hox-C10. (325 aa)
NBL1Neuroblastoma suppressor of tumorigenicity 1. (196 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (643 aa)
CHD9Chromodomain helicase DNA binding protein 9. (2890 aa)
ENSTGUP00000032218annotation not available (253 aa)
TBX3T-box transcription factor TBX3. (731 aa)
HAND1Heart- and neural crest derivatives-expressed protein 1. (202 aa)
FBN1Uncharacterized protein. (2931 aa)
USH1CHarmonin isoform X1. (556 aa)
PDGFRAPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1109 aa)
TBX15Uncharacterized protein. (616 aa)
SLITRK6SLIT and NTRK like family member 6. (840 aa)
NKX2-5Homeobox domain-containing protein. (329 aa)
ASB2Ankyrin repeat and SOCS box containing 2. (668 aa)
CRB2Uncharacterized protein. (1464 aa)
TPRNPhostensin domain-containing protein. (862 aa)
DNAAF1Dynein assembly factor 1, axonemal. (646 aa)
HOXB4Uncharacterized protein. (214 aa)
CLUAP1Clusterin associated protein 1. (429 aa)
ENSTGUP00000028036annotation not available (729 aa)
CTHRC1Collagen triple helix repeat containing 1. (468 aa)
CHST11Carbohydrate sulfotransferase. (350 aa)
PSEN1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (467 aa)
GRXCR2Glutaredoxin and cysteine rich domain containing 2. (295 aa)
ACVR1Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (647 aa)
IGF1Insulin like growth factor 1. (153 aa)
H0ZR32_TAEGUUncharacterized protein; Belongs to the potassium channel family. (510 aa)
MYO3BMyosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1231 aa)
CHD8Chromodomain helicase DNA binding protein 8. (1744 aa)
SLC39A1Solute carrier family 39 (zinc transporter), member 1/2/3. (313 aa)
OTX1Homeobox protein OTX1. (334 aa)
KCNQ1Potassium voltage-gated channel subfamily Q member 1; Belongs to the potassium channel family. (691 aa)
SETDB2SET domain bifurcated histone lysine methyltransferase 2. (721 aa)
SIX4SIX homeobox 4. (749 aa)
SEC24BSEC24 homolog B, COPII coat complex component. (1232 aa)
FOXG1Forkhead box protein G1. (459 aa)
ENSTGUP00000024970annotation not available (389 aa)
STILUncharacterized protein. (1346 aa)
BMP4Bone morphogenetic protein 4. (420 aa)
EFNA1Ephrin A1; Belongs to the ephrin family. (210 aa)
LOC100230015-2Homeobox protein Hox-C9. (258 aa)
ENSTGUP00000024315annotation not available (176 aa)
NEUROD1Neurogenic differentiation factor 1 isoform X1. (363 aa)
PAX5Paired box 5. (417 aa)
DLX2Distal-less homeobox 2. (341 aa)
NIPBLNipped-B protein. (2717 aa)
ENSTGUP00000023855annotation not available (1612 aa)
TCAPTelethonin. (118 aa)
RESTRE1 silencing transcription factor. (893 aa)
ENSTGUP00000023326annotation not available (340 aa)
IFT57Ig-like domain-containing protein. (657 aa)
WDR19WD repeat domain 19. (1359 aa)
PRRX1Paired related homeobox 1. (245 aa)
OSR1Protein odd-skipped-related 1. (260 aa)
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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