(60 nodes) Regulation of synapse assembly network (Taeniopygia guttata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLITRK6	SLIT and NTRK like family member 6. (840 aa)
	AMIGO2	Adhesion molecule with Ig like domain 2. (521 aa)
	ENSTGUP00000031473	annotation not available (499 aa)
	ENSTGUP00000032581	annotation not available (614 aa)
	LINGO2	Leucine rich repeat and Ig domain containing 2. (633 aa)
	COLQ	Collagen like tail subunit of asymmetric acetylcholinesterase. (489 aa)
	ADGRL2	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family. (1484 aa)
	LRFN5	Leucine rich repeat and fibronectin type III domain containing 5. (772 aa)
	NRXN1	Neurexin 1. (1499 aa)
	EPHB2	EPH receptor B2. (995 aa)
	IL1RAPL2	Interleukin 1 receptor accessory protein like 2. (708 aa)
	NTNG2	Netrin G2. (527 aa)
	AGRN	Agrin. (2076 aa)
	NECTIN1	Nectin cell adhesion molecule 1. (515 aa)
	CBLN1	Cerebellin-1. (194 aa)
	SLITRK3	SLIT and NTRK like family member 3. (947 aa)
	MUSK	Muscle associated receptor tyrosine kinase. (938 aa)
	SEMA4A	Semaphorin 4A; Belongs to the semaphorin family. (779 aa)
	ISLR	LRRCT domain-containing protein. (416 aa)
	SLITRK2	SLIT and NTRK like family member 2. (856 aa)
	NTN1	Netrin 1. (606 aa)
	LRRN3	Leucine rich repeat neuronal 3. (740 aa)
	SYNDIG1	Synapse differentiation inducing 1. (258 aa)
	CUX2	Homeobox protein cut-like 2 isoform X1. (1393 aa)
	EPHB1	EPH receptor B1. (1003 aa)
	IL1RAPL1	Interleukin 1 receptor accessory protein like 1. (622 aa)
	ADNP	Activity-dependent neuroprotector homeobox protein isoform X1. (1226 aa)
	IL1RAP	Uncharacterized protein. (691 aa)
	SLIT1	Slit guidance ligand 1. (1538 aa)
	LRRN1	Leucine rich repeat neuronal 1. (716 aa)
	EPHB3	Receptor protein-tyrosine kinase. (991 aa)
	GHSR	Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family. (352 aa)
	LRRTM1	Leucine rich repeat transmembrane neuronal 1. (485 aa)
	LOC100220528	Uncharacterized protein; Belongs to the vasopressin/oxytocin family. (171 aa)
	VSTM5	V-set and transmembrane domain containing 5. (199 aa)
	CLSTN3	Calsyntenin 3. (1017 aa)
	LRRTM2	Leucine rich repeat transmembrane neuronal 2. (517 aa)
	LRRN2	Leucine rich repeat neuronal 2. (675 aa)
	CLSTN1	Calsyntenin 1. (961 aa)
	SLITRK5	SLIT and NTRK like family member 5. (954 aa)
	DLG5	Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family. (2045 aa)
	MYCBP2	MYC binding protein 2. (4725 aa)
	FLRT2	Fibronectin leucine rich transmembrane protein 2. (661 aa)
	LRTM2	Leucine rich repeats and transmembrane domains 2. (370 aa)
	ENSTGUP00000024341	annotation not available (1431 aa)
	SETD5	SET domain containing 5. (1595 aa)
	EEF2K	Eukaryotic elongation factor 2 kinase. (736 aa)
	PDLIM5	PDZ and LIM domain 5. (711 aa)
	ENSTGUP00000024752	annotation not available (290 aa)
	SEMA4D	Semaphorin 4D; Belongs to the semaphorin family. (1032 aa)
	AMIGO1	Amphoterin-induced protein 1. (496 aa)
	CLSTN2	Calsyntenin 2. (945 aa)
	SLITRK4	SLIT and NTRK like family member 4. (837 aa)
	NRXN2	Neurexin 2. (1546 aa)
	FLRT3	Fibronectin leucine rich transmembrane protein 3. (649 aa)
	LRRTM4	Leucine rich repeat transmembrane neuronal 4. (602 aa)
	APP	Amyloid beta precursor protein. (797 aa)
	LOC100224555	Activity dependent neuroprotector homeobox. (1226 aa)
	DKK1	Dickkopf WNT signaling pathway inhibitor 1. (263 aa)
	LRRTM3	Leucine rich repeat transmembrane neuronal 3. (597 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL2	AMIGO1	ENSTGUP00000033595	ENSTGUP00000026146	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Amphoterin-induced protein 1.	0.676
ADGRL2	AMIGO2	ENSTGUP00000033595	ENSTGUP00000031309	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Adhesion molecule with Ig like domain 2.	0.676
ADGRL2	ENSTGUP00000032581	ENSTGUP00000033595	ENSTGUP00000032581	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	annotation not available	0.748
ADGRL2	FLRT2	ENSTGUP00000033595	ENSTGUP00000023483	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Fibronectin leucine rich transmembrane protein 2.	0.738
ADGRL2	FLRT3	ENSTGUP00000033595	ENSTGUP00000028514	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Fibronectin leucine rich transmembrane protein 3.	0.749
ADGRL2	ISLR	ENSTGUP00000033595	ENSTGUP00000004163	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	LRRCT domain-containing protein.	0.676
ADGRL2	LINGO2	ENSTGUP00000033595	ENSTGUP00000032606	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat and Ig domain containing 2.	0.676
ADGRL2	LRFN5	ENSTGUP00000033595	ENSTGUP00000036082	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat and fibronectin type III domain containing 5.	0.676
ADGRL2	LRRN1	ENSTGUP00000033595	ENSTGUP00000010534	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat neuronal 1.	0.681
ADGRL2	LRRN2	ENSTGUP00000033595	ENSTGUP00000017763	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat neuronal 2.	0.681
ADGRL2	LRRN3	ENSTGUP00000033595	ENSTGUP00000005746	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat neuronal 3.	0.681
ADGRL2	LRRTM1	ENSTGUP00000033595	ENSTGUP00000011265	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat transmembrane neuronal 1.	0.676
ADGRL2	LRRTM2	ENSTGUP00000033595	ENSTGUP00000015235	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat transmembrane neuronal 2.	0.690
ADGRL2	LRRTM3	ENSTGUP00000033595	ENSTGUP00000031117	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat transmembrane neuronal 3.	0.696
ADGRL2	LRRTM4	ENSTGUP00000033595	ENSTGUP00000029099	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat transmembrane neuronal 4.	0.705
ADGRL2	LRTM2	ENSTGUP00000033595	ENSTGUP00000024072	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeats and transmembrane domains 2.	0.696
ADGRL2	SLIT1	ENSTGUP00000033595	ENSTGUP00000010134	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	Slit guidance ligand 1.	0.698
ADGRL2	SLITRK2	ENSTGUP00000033595	ENSTGUP00000004897	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	SLIT and NTRK like family member 2.	0.680
ADGRL2	SLITRK3	ENSTGUP00000033595	ENSTGUP00000038466	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	SLIT and NTRK like family member 3.	0.682
ADGRL2	SLITRK4	ENSTGUP00000033595	ENSTGUP00000028087	Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.	SLIT and NTRK like family member 4.	0.676