(35 nodes) Striated muscle cell development network (Taeniopygia guttata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NKX2-5	Homeobox domain-containing protein. (329 aa)
	TMOD1	Tropomodulin 1. (391 aa)
	TNNT2	Troponin T2, cardiac type. (188 aa)
	MYL6-2	Myosin, light chain 6, alkali, smooth muscle and non-muscle. (197 aa)
	MYBPC1	Myosin binding protein C, slow type. (1199 aa)
	TNNT3	Troponin T3, fast skeletal type. (387 aa)
	ENSTGUP00000032818	Muscle M-line assembly protein unc-89-like. (2064 aa)
	TMOD4	Tropomodulin 4. (178 aa)
	CAPN3	Calpain 3; Belongs to the peptidase C2 family. (809 aa)
	FLII	FLII actin remodeling protein. (1265 aa)
	MYOZ1	Myozenin 1. (294 aa)
	TMOD2	Tropomodulin 2. (351 aa)
	TMOD3	Uncharacterized protein. (351 aa)
	SRF	Serum response factor. (485 aa)
	LMOD2	Leiomodin 2. (541 aa)
	PRKAR1A	Protein kinase cAMP-dependent type I regulatory subunit alpha. (382 aa)
	MYL6	Myosin, light chain 6, alkali, smooth muscle and non-muscle. (152 aa)
	CSRP2	Cysteine and glycine rich protein 2. (194 aa)
	LMOD1	Leiomodin 1. (664 aa)
	PGM5	Phosphoglucomutase 5. (590 aa)
	CSRP1	Cysteine and glycine rich protein 1. (206 aa)
	MYL9	Myosin light chain 9. (246 aa)
	TCAP	Telethonin. (118 aa)
	H0Z5M1_TAEGU	Uncharacterized protein. (273 aa)
	SDC1	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (315 aa)
	MEF2A	Myocyte enhancer factor 2A. (496 aa)
	TMOD4-2	Tropomodulin 4. (340 aa)
	CSRP3	Cysteine and glycine rich protein 3. (196 aa)
	NEB	Nebulin. (5578 aa)
	NRAP	Nebulin related anchoring protein. (1737 aa)
	LOC100218287	Uncharacterized protein. (359 aa)
	WDR1	WD_REPEATS_REGION domain-containing protein. (607 aa)
	LMOD3	Uncharacterized protein. (569 aa)
	ANKRD1	Ankyrin repeat domain 1. (359 aa)
	MYOZ2	Myozenin 2. (263 aa)

Your Current Organism:

Taeniopygia guttata

NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSRP3	LMOD2	ENSTGUP00000016201	ENSTGUP00000004449	Cysteine and glycine rich protein 3.	Leiomodin 2.	0.497
CSRP3	LMOD3	ENSTGUP00000016201	ENSTGUP00000010094	Cysteine and glycine rich protein 3.	Uncharacterized protein.	0.440
CSRP3	MYOZ2	ENSTGUP00000016201	ENSTGUP00000001945	Cysteine and glycine rich protein 3.	Myozenin 2.	0.833
CSRP3	NRAP	ENSTGUP00000016201	ENSTGUP00000011199	Cysteine and glycine rich protein 3.	Nebulin related anchoring protein.	0.529
CSRP3	TCAP	ENSTGUP00000016201	ENSTGUP00000023683	Cysteine and glycine rich protein 3.	Telethonin.	0.799
CSRP3	TNNT2	ENSTGUP00000016201	ENSTGUP00000001377	Cysteine and glycine rich protein 3.	Troponin T2, cardiac type.	0.414
CSRP3	TNNT3	ENSTGUP00000016201	ENSTGUP00000032828	Cysteine and glycine rich protein 3.	Troponin T3, fast skeletal type.	0.407
ENSTGUP00000032818	LOC100218287	ENSTGUP00000032818	ENSTGUP00000010344	Muscle M-line assembly protein unc-89-like.	Uncharacterized protein.	0.424
ENSTGUP00000032818	MYL9	ENSTGUP00000032818	ENSTGUP00000027411	Muscle M-line assembly protein unc-89-like.	Myosin light chain 9.	0.424
LMOD1	LOC100218287	ENSTGUP00000029548	ENSTGUP00000010344	Leiomodin 1.	Uncharacterized protein.	0.514
LMOD1	MYL6	ENSTGUP00000029548	ENSTGUP00000029917	Leiomodin 1.	Myosin, light chain 6, alkali, smooth muscle and non-muscle.	0.502
LMOD1	MYL6-2	ENSTGUP00000029548	ENSTGUP00000031199	Leiomodin 1.	Myosin, light chain 6, alkali, smooth muscle and non-muscle.	0.502
LMOD1	MYL9	ENSTGUP00000029548	ENSTGUP00000027411	Leiomodin 1.	Myosin light chain 9.	0.514
LMOD1	NEB	ENSTGUP00000029548	ENSTGUP00000012432	Leiomodin 1.	Nebulin.	0.561
LMOD2	CSRP3	ENSTGUP00000004449	ENSTGUP00000016201	Leiomodin 2.	Cysteine and glycine rich protein 3.	0.497
LMOD2	MYOZ2	ENSTGUP00000004449	ENSTGUP00000001945	Leiomodin 2.	Myozenin 2.	0.524
LMOD2	NEB	ENSTGUP00000004449	ENSTGUP00000012432	Leiomodin 2.	Nebulin.	0.507
LMOD2	NRAP	ENSTGUP00000004449	ENSTGUP00000011199	Leiomodin 2.	Nebulin related anchoring protein.	0.484
LMOD3	CSRP3	ENSTGUP00000010094	ENSTGUP00000016201	Uncharacterized protein.	Cysteine and glycine rich protein 3.	0.440
LMOD3	MYOZ2	ENSTGUP00000010094	ENSTGUP00000001945	Uncharacterized protein.	Myozenin 2.	0.524